RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 RASSF3Q86WH2 238 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 POLR3BQ9NW08 1133 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TSC2P49815 1807 aa13.17□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ANK1P16157 1881 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 A0A0B4J269 797 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PDE6CP51160 858 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NEK4P51957 841 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 RPL10AP62906 217 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 IRX4P78413 519 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 POU5F1Q01860 360 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HYIQ5T013 277 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 KCNK18Q7Z418 384 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TMEM130Q8N3G9 435 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 DEFB124Q8NES8 71 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PIGKQ92643 395 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CDK5RAP3Q96JB5 506 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PYM1Q9BRP8 204 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CPSF3Q9UKF6 684 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ODF2LQ9ULJ1 636 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MAST4O15021 2626 aa13.16□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TCHHQ07283 1943 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 OBSL1O75147 1896 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MYO16Q9Y6X6 1858 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PP2D1A8MPX8 630 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 NFATC1O95644 943 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 CKMP06732 381 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HOXD12P35452 270 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 PNPLA4P41247 253 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 RING1Q06587 406 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ZNF77Q15935 545 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 EML3Q32P44 896 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SV2CQ496J9 727 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LRRTM3Q86VH5 581 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 SYT12Q8IV01 421 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 USP33Q8TEY7 942 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 EZH1Q92800 747 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MYRFLQ96LU7 910 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 MMP17Q9ULZ9 603 aa13.15□□□□□ -0.3
CDK5RAP3-216ENST00000579853 KIAA1549LQ6ZVL6 1849 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PATE3B3GLJ2 98 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MAP3K13O43283 966 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 NFICP08651 508 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PLA2G4BP0C869 781 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TCF3P15923 654 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MRPS21P82921 87 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 USP4Q13107 963 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 NBR1Q14596 966 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CRY1Q16526 586 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 NT5DC4Q86YG4 428 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KIAA1958Q8N8K9 716 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 DPP3Q9NY33 737 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 INVSQ9Y283 1065 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
CDK5RAP3-216ENST00000579853 K7ENM7 598 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HYAL3O43820 417 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms