RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 C17orf53Q8N3J3 647 aaPredicted RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 LATS2Q9NRM7 1088 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 HDAC6Q9UBN7 1215 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 MRFAP1Q9Y605 127 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 TRAV19A0A0A6YYK7 116 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 A0A0G2JLL6 359 aaPredicted RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 MAFO75444 373 aaPredicted RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 SLITRK3O94933 977 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 GRIK3Q13003 919 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ACAD11Q709F0 780 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 PRRT2Q7Z6L0 340 aaPredicted RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 SPG21Q9NZD8 308 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 AAR2Q9Y312 384 aaKnown RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 ROBO1Q9Y6N7 1651 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 GTPBP10A4D1E9 387 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 ZNF263O14978 683 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 ELNP15502 786 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 CDR2Q01850 454 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 CCDC137Q6PK04 289 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 UNC93AQ86WB7 457 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 CCDC124Q96CT7 223 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 TEX12Q9BXU0 123 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 SNX24Q9Y343 169 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FHOD1Q9Y613 1164 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 YDJCA8MPS7 323 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FAM86B1E9PN63 330 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 INHAP05111 366 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FAM86B2P0C5J1 330 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FDFT1P37268 417 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 ARSEP51690 589 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 AMHR2Q16671 573 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FASTKD1Q53R41 847 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 ACBD5Q5T8D3 534 aaPredicted RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 SLFN11Q7Z7L1 901 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 PPM1NQ8N819 430 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 C1orf131Q8NDD1 294 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 ERGIC2Q96RQ1 377 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 GAD1Q99259 594 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 EML4Q9HC35 981 aaKnown RBP10.65□□□□□ -0.7
MSI2-209ENST00000579483 NFKBIEO00221 500 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 GRAP2O75791 330 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 PAEPP09466 180 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 TYK2P29597 1187 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 TKTL1P51854 596 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 MAP3K7CLP57077 242 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 RHOAP61586 193 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 SGCGQ13326 291 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 ADCK2Q7Z695 626 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 IL17RAQ96F46 866 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 PI4K2AQ9BTU6 479 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 ADGRE3Q9BY15 652 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 ARHGEF38Q9NXL2 777 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 FIS1Q9Y3D6 152 aa10.65□□□□□ -0.7
MSI2-209ENST00000579483 SIGLEC1Q9BZZ2 1709 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 PRPF4O43172 522 aaKnown RBP eCLIP10.65□□□□□ -0.71
MSI2-209ENST00000579483 CTIFO43310 598 aaKnown RBP10.65□□□□□ -0.71
MSI2-209ENST00000579483 STIP1P31948 543 aaKnown RBP10.65□□□□□ -0.71
MSI2-209ENST00000579483 FBXW4P57775 412 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 LBRQ14739 615 aaKnown RBP10.65□□□□□ -0.71
MSI2-209ENST00000579483 HIF1AQ16665 826 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 DCLRE1AQ6PJP8 1040 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 KSR1Q8IVT5 923 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 LZTR1Q8N653 840 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 CBWD1Q9BRT8 395 aa10.65□□□□□ -0.71
MSI2-209ENST00000579483 OR6C75A6NL08 312 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 GPR25O00155 361 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 GNGT2O14610 69 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 RECQL4O94761 1208 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 GJB1P08034 283 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 AKAP5P24588 427 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 SERPINB9P50453 376 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 TBX4P57082 545 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 PDIA2Q13087 525 aaKnown RBP10.64□□□□□ -0.71
MSI2-209ENST00000579483 SPARCL1Q14515 664 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 FSCBQ5H9T9 825 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 C12orf42Q96LP6 360 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 SERPINI1Q99574 410 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 CNPY3Q9BT09 278 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 TRIM15Q9C019 465 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
MSI2-209ENST00000579483 Q9H521 79 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 CISHQ9NSE2 258 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 SPACA6W5XKT8 324 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 SLC9A1P19634 815 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 HDAC4P56524 1084 aa10.64□□□□□ -0.71
MSI2-209ENST00000579483 NTRK3Q16288 839 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms