RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 UXTQ9UBK9 157 aaPredicted RBP15.86■□□□□ 0.13
SS18-212ENST00000579061 NXF1Q9UBU9 619 aaKnown RBP15.86■□□□□ 0.13
SS18-212ENST00000579061 CA14Q9ULX7 337 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 CACNA1HO95180 2353 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 CETN3O15182 167 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 ATP2C2O75185 946 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 NOL4O94818 638 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 F11P03951 625 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 PDGFRBP09619 1106 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 P4HA1P13674 534 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 PSMC3P17980 439 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 DDX6P26196 483 aaKnown RBP eCLIP15.85■□□□□ 0.13
SS18-212ENST00000579061 PPP1R2P41236 205 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 CDR1P51861 262 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 PTPN5P54829 565 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 PSMC1P62191 440 aaKnown RBP15.85■□□□□ 0.13
SS18-212ENST00000579061 SLC44A4Q53GD3 710 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 GPR158Q5T848 1215 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 MFSD6LQ8IWD5 586 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 PRSS33Q8NF86 280 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 MYLPFQ96A32 169 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 TRMT2BQ96GJ1 504 aaKnown RBP15.85■□□□□ 0.13
SS18-212ENST00000579061 MYRFLQ96LU7 910 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 TSG101Q99816 390 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 TRMT61BQ9BVS5 477 aaKnown RBP15.85■□□□□ 0.13
SS18-212ENST00000579061 IRF2BPLQ9H1B7 796 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 TASP1Q9H6P5 420 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 TBC1D17Q9HA65 648 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 OBP2AQ9NY56 170 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 MIA3Q5JRA6 1907 aa15.85■□□□□ 0.13
SS18-212ENST00000579061 ANAPC1Q9H1A4 1944 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 PTPN1P18031 435 aaKnown RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 RFX1P22670 979 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 GTF2H1P32780 548 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 GPR15P49685 360 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 NLRP12P59046 1061 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 LRRC63Q05C16 580 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 MLF2Q15773 248 aaPredicted RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 DDR2Q16832 855 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 CCDC142Q17RM4 750 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 VITQ6UXI7 678 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 ARID3BQ8IVW6 561 aaPredicted RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 ZC3H3Q8IXZ2 948 aaKnown RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 IRF7Q92985 503 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 PCED1BQ96HM7 432 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 SPATA17Q96L03 361 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 DDX23Q9BUQ8 820 aaKnown RBP15.84■□□□□ 0.13
SS18-212ENST00000579061 BRD9Q9H8M2 597 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 NME7Q9Y5B8 376 aa15.84■□□□□ 0.13
SS18-212ENST00000579061 F5P12259 2224 aa15.83■□□□□ 0.13
SS18-212ENST00000579061 SLC38A8A6NNN8 435 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 HEPACAM2A8MVW5 462 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 A8MXQ7 604 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 STK25O00506 426 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 GADD45BO75293 160 aaPredicted RBP15.83■□□□□ 0.12
SS18-212ENST00000579061 EPB41P11171 864 aaKnown RBP15.83■□□□□ 0.12
SS18-212ENST00000579061 BDNFP23560 247 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 ANP32AP39687 249 aaKnown RBP15.83■□□□□ 0.12
SS18-212ENST00000579061 VIPR2P41587 438 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 PIK3CAP42336 1068 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 FKBP3Q00688 224 aaKnown RBP15.83■□□□□ 0.12
SS18-212ENST00000579061 STIM1Q13586 685 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 MDH1BQ5I0G3 518 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 STXBP5Q5T5C0 1151 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 TMEM150AQ86TG1 271 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 ADSSL1Q8N142 457 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 B3GALNT2Q8NCR0 500 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 TNIP3Q96KP6 325 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 OSBPL6Q9BZF3 934 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 IMPG2Q9BZV3 1241 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 TMEM8AQ9HCN3 771 aa15.83■□□□□ 0.12
SS18-212ENST00000579061 COL4A2P08572 1712 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 TICRRQ7Z2Z1 1910 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 MYH10P35580 1976 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 DPYSL4O14531 572 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 PSMA7O14818 248 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 TRIM66O15016 1216 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CHADO15335 359 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 SLC16A3O15427 465 aaKnown RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 PI15O43692 258 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 STX10O60499 249 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 TRIM49P0CI25 452 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 TRIM49CP0CI26 452 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CCNE1P24864 410 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 GRIK1P39086 918 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 GCLMP48507 274 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CDH8P55286 799 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 UBE2HP62256 183 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CYP4F8P98187 520 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CYP27A1Q02318 531 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 NHLH1Q02575 133 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 PPP3CAQ08209 521 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 FCHO2Q0JRZ9 810 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 TCF15Q12870 199 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 GRM2Q14416 872 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms