RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 NR1H3Q13133 447 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 PDIA5Q14554 519 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 ANKRD1Q15327 319 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 ENOX2Q16206 610 aaKnown RBP9.4□□□□□ -0.9
BRIP1-204ENST00000579028 CRY1Q16526 586 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 ME3Q16798 604 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 SPDYCQ5MJ68 293 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.9
BRIP1-204ENST00000579028 C9orf57Q5W0N0 161 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
BRIP1-204ENST00000579028 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 CD302Q8IX05 232 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 CHCHD4Q8N4Q1 142 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 NECAB1Q8N987 351 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 IGSF22Q8N9C0 903 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 KCNN1Q92952 543 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 TMEM206Q9H813 350 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 RPF1Q9H9Y2 349 aaKnown RBP9.4□□□□□ -0.9
BRIP1-204ENST00000579028 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 ABI2Q9NYB9 513 aaPredicted RBP9.4□□□□□ -0.9
BRIP1-204ENST00000579028 WNT6Q9Y6F9 365 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 MYH11P35749 1972 aa9.4□□□□□ -0.9
BRIP1-204ENST00000579028 FASNP49327 2511 aaKnown RBP9.4□□□□□ -0.91
BRIP1-204ENST00000579028 ASPMQ8IZT6 3477 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 OGTO15294 1046 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 JAK2O60674 1132 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 TCF3P15923 654 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 HOXD12P35452 270 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 OPRD1P41143 372 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 PTGER3P43115 390 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 CDR1P51861 262 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 MRPS21P82921 87 aaKnown RBP9.39□□□□□ -0.91
BRIP1-204ENST00000579028 SAFBQ15424 915 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRIP1-204ENST00000579028 ZNF423Q2M1K9 1284 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 TTC38Q5R3I4 469 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 LMBRD2Q68DH5 695 aaPredicted RBP9.39□□□□□ -0.91
BRIP1-204ENST00000579028 JADE1Q6IE81 842 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 C19orf48Q6RUI8 117 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 METTL23Q86XA0 190 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 THEM5Q8N1Q8 247 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 TRMT2BQ96GJ1 504 aaKnown RBP9.39□□□□□ -0.91
BRIP1-204ENST00000579028 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 FNBP1Q96RU3 617 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 UXTQ9UBK9 157 aaPredicted RBP9.39□□□□□ -0.91
BRIP1-204ENST00000579028 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 SCN1AP35498 2009 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 IGF2RP11717 2491 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
BRIP1-204ENST00000579028 PCDH15Q96QU1 1955 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 ANTXRLA6NF34 631 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 CYB561D2O14569 222 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 SNPHO15079 494 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 NOL4O94818 638 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 NFATC1O95644 943 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 PIGRP01833 764 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 NFICP08651 508 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 HNRNPLP14866 589 aaKnown RBP eCLIP9.38□□□□□ -0.917e-8■□□□□ 10.1
BRIP1-204ENST00000579028 CDC25AP30304 524 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 TRAPPC10P48553 1259 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 GPR15P49685 360 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 SEC13P55735 322 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 FAM193AP78312 1265 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 SCAPQ12770 1279 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 HNRNPDQ14103 355 aaKnown RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 COL28A1Q2UY09 1125 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 GAB4Q2WGN9 574 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 HSF5Q4G112 596 aaPredicted RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 C2orf27AQ580R0 203 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 WSCD1Q658N2 575 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 ARMCX6Q7L4S7 300 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 KCNK18Q7Z418 384 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 EFCAB13Q8IY85 973 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 HDDC3Q8N4P3 179 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 CCDC33Q8N5R6 958 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 STKLD1Q8NE28 680 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 LEO1Q8WVC0 666 aaPredicted RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 RLN3Q8WXF3 142 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 MYRFLQ96LU7 910 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 SLC22A12Q96S37 553 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 PYM1Q9BRP8 204 aaKnown RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 FOXP1Q9H334 677 aaPredicted RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 TMLHEQ9NVH6 421 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 GCNT4Q9P109 453 aa9.38□□□□□ -0.91
BRIP1-204ENST00000579028 MBD1Q9UIS9 605 aaPredicted RBP9.38□□□□□ -0.91
BRIP1-204ENST00000579028 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms