RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 CBWD2Q8IUF1 395 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 ITFG1Q8TB96 612 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 BAP1Q92560 729 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 FGF13Q92913 245 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 FAM81BQ96LP2 452 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 TARS2Q9BW92 718 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 TSGA10Q9BZW7 698 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 GANQ9H2C0 597 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 NXF3Q9H4D5 531 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 TMEM8AQ9HCN3 771 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 PRMT7Q9NVM4 692 aaPredicted RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 STYXL1Q9Y6J8 313 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 ARID2Q68CP9 1835 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 SSU72P8A0A1W2PR75 194 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 ACKR2O00590 384 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 PMM2O15305 246 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 KRT86O43790 486 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 NOL4O94818 638 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 PAPLNO95428 1278 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 EFEMP2O95967 443 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 C8AP07357 584 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 DLATP10515 647 aaKnown RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 ARF4P18085 180 aaPredicted RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 AP3M2P53677 418 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 CYP24A1Q07973 514 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 MTF1Q14872 753 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 LPAL2Q16609 132 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 KYAT1Q16773 422 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 RTP2Q5QGT7 225 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 FAM171A1Q5VUB5 890 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 MTSS1LQ765P7 747 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 TAS1R3Q7RTX0 852 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 ING5Q8WYH8 240 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 CHP1Q99653 195 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 PAAF1Q9BRP4 392 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 NFKBIZQ9BYH8 718 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 STK33Q9BYT3 514 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 RBAKQ9NYW8 714 aaPredicted RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 FBXO4Q9UKT5 387 aa10.87□□□□□ -0.67
SS18-210ENST00000578700 CDV3Q9UKY7 258 aaKnown RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 R3HCC1Q9Y3T6 440 aaKnown RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 ZFP37Q9Y6Q3 630 aaPredicted RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
SS18-210ENST00000578700 A0A0B4J269 797 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 EPHB6O15197 1021 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 SPTLC1O15269 473 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 B4GALT5O43286 388 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 XYLBO75191 536 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CLSTN1O94985 981 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 C1RP00736 705 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 TNNI1P19237 187 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 SDHBP21912 280 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CASQ1P31415 396 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
SS18-210ENST00000578700 KIF11P52732 1056 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 MFAP3P55082 362 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 PTENP60484 403 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 GNG11P61952 73 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
SS18-210ENST00000578700 PFKPQ01813 784 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CREMQ03060 361 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 PRKCQQ04759 706 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 PSMD6Q15008 389 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 ZNF528Q3MIS6 628 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 WDR44Q5JSH3 913 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CBWD3Q5JTY5 395 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CBWD5Q5RIA9 395 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 ATF7IP2Q5U623 682 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 SLC39A4Q6P5W5 647 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 FBXL13Q8NEE6 735 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 PARD3BQ8TEW8 1205 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 MCRS1Q96EZ8 462 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 CLSTN3Q9BQT9 956 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
SS18-210ENST00000578700 CCDC113Q9H0I3 377 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 LZTFL1Q9NQ48 299 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 HCFC1R1Q9NWW0 138 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 ZSCAN32Q9NX65 697 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
SS18-210ENST00000578700 FBXW11Q9UKB1 542 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms