RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 NFX1Q12986 1120 aaKnown RBP29.2■■■□□ 2.27
LIMD2-203ENST00000578067 KCNA10Q16322 511 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 RPAINQ86UA6 219 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 KLHDC9Q8NEP7 349 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 DCLK3Q9C098 648 aa29.2■■■□□ 2.27
LIMD2-203ENST00000578067 SENP6Q9GZR1 1112 aaPredicted RBP29.2■■■□□ 2.27
LIMD2-203ENST00000578067 DDX56Q9NY93 547 aaKnown RBP29.2■■■□□ 2.27
LIMD2-203ENST00000578067 OPA1O60313 960 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 CHRNA1P02708 482 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 KRT1P04264 644 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 PFKMP08237 780 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 GBP1P32455 592 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 ZFYVE27Q5T4F4 411 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 SH3GL2Q99962 352 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 CHST7Q9NS84 486 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 ZDHHC18Q9NUE0 388 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 PTPN22Q9Y2R2 807 aa29.2■■■□□ 2.26
LIMD2-203ENST00000578067 CTSHP09668 335 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 ELNP15502 786 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 TAF6P49848 677 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 SNX1Q13596 522 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 REM2Q8IYK8 340 aaPredicted RBP29.19■■■□□ 2.26
LIMD2-203ENST00000578067 PIK3R5Q8WYR1 880 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 SLITRK1Q96PX8 696 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 GOLGA2P5Q9HBQ8 144 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 PRDM10Q9NQV6 1147 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 CHST12Q9NRB3 414 aa29.19■■■□□ 2.26
LIMD2-203ENST00000578067 SPTLC1O15269 473 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 MYCNP04198 464 aaPredicted RBP29.18■■■□□ 2.26
LIMD2-203ENST00000578067 FLT3P36888 993 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 SV2CQ496J9 727 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 ANKS1BQ7Z6G8 1248 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 FMO2Q99518 471 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 KLHL11Q9NVR0 708 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 A8MXQ7 604 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 PI4K2BG5E9Z4 385 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 COPS2P61201 443 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 PKDCCQ504Y2 493 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 POLNQ7Z5Q5 900 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 EMC1Q8N766 993 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 GOLGA6L1Q8N7Z2 621 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 ATG4AQ8WYN0 398 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 GRHL1Q9NZI5 618 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 R3HDM2Q9Y2K5 976 aaKnown RBP29.18■■■□□ 2.26
LIMD2-203ENST00000578067 CASP8AP2Q9UKL3 1982 aa29.18■■■□□ 2.26
LIMD2-203ENST00000578067 CST5P28325 142 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-203ENST00000578067 RPL21P46778 160 aaKnown RBP29.17■■■□□ 2.26
LIMD2-203ENST00000578067 GYS2P54840 703 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 MGAT3Q09327 533 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 ODF2Q5BJF6 829 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 FAM102AQ5T9C2 384 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-203ENST00000578067 TXNRD3NBQ6F5E7 133 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 CCSAPQ6IQ19 270 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-203ENST00000578067 KBTBD7Q8WVZ9 684 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 CAPNS2Q96L46 248 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 FAM49BQ9NUQ9 324 aa29.17■■■□□ 2.26
LIMD2-203ENST00000578067 FEZ2Q9UHY8 353 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-203ENST00000578067 PTGESO14684 152 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 SETSIPP0DME0 302 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 PPP1R7Q15435 360 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 CCNG2Q16589 344 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 ARHGAP17Q68EM7 881 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 TTC30AQ86WT1 665 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 GRK7Q8WTQ7 553 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 FAM105AQ9NUU6 356 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 HESX1Q9UBX0 185 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 E5RJQ4 531 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 LRCH4O75427 683 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 LRPAP1P30533 357 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 GNL1P36915 607 aaPredicted RBP29.16■■■□□ 2.26
LIMD2-203ENST00000578067 HSD17B3P37058 310 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 PLTPP55058 493 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 ACAP1Q15027 740 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 DEFB115Q30KQ5 88 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 ZDHHC24Q6UX98 284 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 MFSD7Q6UXD7 560 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 SPOCD1Q6ZMY3 1216 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 SYDE1Q6ZW31 735 aaPredicted RBP29.16■■■□□ 2.26
LIMD2-203ENST00000578067 LIMS2Q7Z4I7 341 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 TMC3Q7Z5M5 1100 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 HACE1Q8IYU2 909 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 ARFGAP1Q8N6T3 406 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 APPL2Q8NEU8 664 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 PPP1R10Q96QC0 940 aaKnown RBP29.16■■■□□ 2.26
LIMD2-203ENST00000578067 ADAM21Q9UKJ8 722 aa29.16■■■□□ 2.26
LIMD2-203ENST00000578067 PTPN7P35236 360 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 MTMR3Q13615 1198 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 HADHQ16836 314 aaKnown RBP29.15■■■□□ 2.26
LIMD2-203ENST00000578067 OR6B2Q6IFH4 312 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 CRYBG2Q8N1P7 616 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 ATL2Q8NHH9 583 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 SNX25Q9H3E2 840 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 DPEP3Q9H4B8 488 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 GRIN2DO15399 1336 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 GOLGA8KD6RF30 607 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 GPR182O15218 404 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 KRT7P08729 469 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 FGFR1P11362 822 aa29.15■■■□□ 2.26
LIMD2-203ENST00000578067 SLC25A11Q02978 314 aaKnown RBP29.15■■■□□ 2.26
LIMD2-203ENST00000578067 KRT17Q04695 432 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms