RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 GPAT2Q6NUI2 795 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SCN4BQ8IWT1 228 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 FOPNLQ96NB1 174 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PAFAH2Q99487 392 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TNFAIP8O95379 198 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PLEKP08567 350 aaPredicted RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 CUL2Q13617 745 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 ELMO2Q96JJ3 720 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 MMTAG2Q9BU76 263 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TMEM245Q9H330 911 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 JMJD4Q9H9V9 463 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 POLD4Q9HCU8 107 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 COPG2Q9UBF2 871 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 ATXN2Q99700 1313 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SNTNA6NMZ2 147 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 FAM58BPP0C7Q3 252 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PNPLA4P41247 253 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 EMC2Q15006 297 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 DEPDC1Q5TB30 811 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 RAB42Q8N4Z0 105 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PCDHB8Q9UN66 801 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PREPLQ4J6C6 727 aaPredicted RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SNX30Q5VWJ9 437 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 TBC1D19Q8N5T2 526 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 KLF6Q99612 283 aaPredicted RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 BTBD10Q9BSF8 475 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 LRRC40Q9H9A6 602 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 STMN3Q9NZ72 180 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 C5orf58C9J3I9 102 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 ABLIM1O14639 778 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 RALBP11234 206 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 CHRNB3Q05901 458 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF844Q08AG5 666 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SEL1L3Q68CR1 1132 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 PRMT9Q6P2P2 845 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 IZUMO2Q6UXV1 221 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 RBM46Q8TBY0 533 aaKnown RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 ZBTB10Q96DT7 871 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 FOXN3O00409 490 aaPredicted RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 ATP6V1B1P15313 513 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 DNAJB2P25686 324 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 URGCPQ8TCY9 931 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 TLR10Q9BXR5 811 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SLC30A1Q9Y6M5 507 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF263O14978 683 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 AP5Z1O43299 807 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 RIPK2O43353 540 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 RBP1P09455 135 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 PCSK1P29120 753 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 PLOD1Q02809 727 aaPredicted RBP11.15□□□□□ -0.62
SEC22B-201ENST00000578049 NAB1Q13506 487 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 DENND1BQ6P3S1 775 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 TAS2R42Q7RTR8 314 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 GPRASP2Q96D09 838 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 GANQ9H2C0 597 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 TMEM51Q9NW97 253 aa11.15□□□□□ -0.62
SEC22B-201ENST00000578049 SLC45A4Q5BKX6 768 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 CROCCP3Q8IVE0 287 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 NUP93Q8N1F7 819 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 FBXO36Q8NEA4 188 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF483Q8TF39 744 aaPredicted RBP11.15□□□□□ -0.63
SEC22B-201ENST00000578049 TBCBQ99426 244 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 TJP2Q9UDY2 1190 aa11.15□□□□□ -0.63
SEC22B-201ENST00000578049 C19orf81C9J6K1 198 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ECE2O60344 883 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 NR3C2P08235 984 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 MYL4P12829 197 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 RGS2P41220 211 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 MROH9Q5TGP6 573 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 STRIP1Q5VSL9 837 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 IFNEQ86WN2 208 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 DLG3Q92796 817 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 FAM162AQ96A26 154 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 NCKIPSDQ9NZQ3 722 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 GPR75-ASB3A0A0A6YYF3 556 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 F9P00740 461 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 GSNP06396 782 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ALADP13716 330 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms