RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PIK3CDO00329 1044 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 SNX2O60749 519 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 MYL6P60660 151 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 IRX1P78414 480 aaPredicted RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 UGP2Q16851 508 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 EPS8L1Q8TE68 723 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 PRPF31Q8WWY3 499 aaKnown RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 ZNF606Q8WXB4 792 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 MED15Q96RN5 788 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 ZBTB18Q99592 522 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 CGRRF1Q99675 332 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 UBA6A0AVT1 1052 aaPredicted RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 MAGEB2O15479 319 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 GNAT1P11488 350 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 PDK1Q15118 436 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 KCTD19Q17RG1 926 aaPredicted RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 CDY2AQ9Y6F7 541 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 CDY1Q9Y6F8 540 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 BNIP3LO60238 219 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SHBGP04278 402 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 TCF7P36402 384 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 GCNT1Q02742 428 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 PPATQ06203 517 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 DDIASQ8IXT1 998 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 NCLNQ969V3 563 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 EME1Q96AY2 570 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 PCDH9Q9HC56 1237 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SHOC2Q9UQ13 582 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 HBP1O60381 514 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 DNAJC6O75061 913 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 DAB2IPQ5VWQ8 1189 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 STYK1Q6J9G0 422 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 APOBEC3HQ6NTF7 200 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 MFSD7Q6UXD7 560 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 LNX1Q8TBB1 728 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 NAF1Q96HR8 494 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 RMDN2Q96LZ7 410 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 C20orf96Q9NUD7 363 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 AURKCQ9UQB9 309 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 USP20Q9Y2K6 914 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ASTN1O14525 1302 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 DNALI1O14645 258 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 FGRP09769 529 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ACADSP16219 412 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 TCN1P20061 433 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 SSTR1P30872 391 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 COPAP53621 1224 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ANGEL2Q5VTE6 544 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 BTBD8Q5XKL5 378 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 C4orf22Q6V702 233 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 CNPY4Q8N129 248 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 PTPRN2Q92932 1015 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SPON2Q9BUD6 331 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 SP110Q9HB58 689 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 ABCF3Q9NUQ8 709 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 EEF2KO00418 725 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 MEIS2O14770 477 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 YTHDF3Q7Z739 585 aaKnown RBP11.35□□□□□ -0.59
RNF43-203ENST00000577716 SLC26A11Q86WA9 606 aa11.35□□□□□ -0.59
RNF43-203ENST00000577716 PTPN4P29074 926 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 DLG4P78352 724 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 COBLL1Q53SF7 1204 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 PRELID2Q8N945 189 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 MRPL1Q9BYD6 325 aaKnown RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 FRMD8P1Q9BZ68 369 aaPredicted RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 DGKIO75912 1065 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 GFAPP14136 432 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 PTGER2P43116 358 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 BIRC2Q13490 618 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 ERMARDQ5T6L9 678 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms