RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PRKCIP41743 596 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 STAT1P42224 750 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BRCC3P46736 316 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CDH8P55286 799 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KRT17Q04695 432 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LRMPQ12912 555 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CAMK1Q14012 370 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ANGPT1Q15389 498 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MEA1Q16626 185 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PPFIBP1Q86W92 1011 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CCDC105Q8IYK2 499 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RUBCNQ92622 972 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PCMTD1Q96MG8 357 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PANX2Q96RD6 677 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 VN1R3Q9BXE9 311 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 IGFLR1Q9H665 355 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SORCS3Q9UPU3 1222 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MFAP3LO75121 409 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FGF18O76093 207 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TPM1P09493 284 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CCDC172P0C7W6 258 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KRT9P35527 623 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RAD23BP54727 409 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 GSDMDP57764 484 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BPIFB4P59827 614 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DSG1Q02413 1049 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 YWHAHQ04917 246 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SPOUT1Q5T280 376 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FAM171BQ6P995 826 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ANKS3Q6ZW76 656 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CACNA2D4Q7Z3S7 1137 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KLHL23Q8NBE8 558 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TMEM169Q96HH4 297 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TMEM176AQ96HP8 235 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SPAG5Q96R06 1193 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PKMYT1Q99640 499 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RTP3Q9BQQ7 232 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MRPL45Q9BRJ2 306 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TTPALQ9BTX7 342 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HERC2P3Q9BVR0 1158 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SMYD3Q9H7B4 428 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NLRC4Q9NPP4 1024 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SSX2IPQ9Y2D8 614 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NME7Q9Y5B8 376 aa11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BZW2Q9Y6E2 419 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ZFYVE26Q68DK2 2539 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LRRC53A6NM62 1247 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 GLP2RO95838 553 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CTSAP10619 480 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FERP16591 822 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LMO2P25791 158 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PCSK1P29120 753 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PBX3P40426 434 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NDST1P52848 882 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SMARCB1Q12824 385 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FAM171A1Q5VUB5 890 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 OVOS1Q6IE37 1185 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SLC8B1Q6J4K2 584 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PDE12Q6L8Q7 609 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TAS1R1Q7RTX1 841 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ZNF677Q86XU0 584 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ADGRF2Q8IZF7 708 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 THEM5Q8N1Q8 247 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SLC4A11Q8NBS3 891 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KREMEN2Q8NCW0 462 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TNIP3Q96KP6 325 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SYT11Q9BT88 431 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NT5C1AQ9BXI3 368 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ABHD10Q9NUJ1 306 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CDH9Q9ULB4 789 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KIAA1671Q9BY89 1806 aa11.85□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FANCMQ8IYD8 2048 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms