RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CILPO75339 1184 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ANXA13P27216 316 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GBP2P32456 591 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PDZD4Q76G19 769 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 EHBP1Q8NDI1 1231 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PCED1BQ96HM7 432 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FAM81BQ96LP2 452 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TUBGCP2Q9BSJ2 902 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 INTS2Q9H0H0 1204 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 DPEP3Q9H4B8 488 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CISHQ9NSE2 258 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CEP72Q9P209 647 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 C2CD4DB7Z1M9 353 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LRRN2O75325 713 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SOAT2O75908 522 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CSH1P0DML2 217 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CSH2P0DML3 217 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ATF6P18850 670 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 BDNFP23560 247 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CYP2F1P24903 491 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 EPHA5P54756 1037 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NTHL1P78549 312 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GCNT1Q02742 428 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LRMPQ12912 555 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HSP90AA4PQ58FG1 418 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CDKAL1Q5VV42 579 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ACOT1Q86TX2 421 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TATDN2Q93075 761 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SMARCD1Q96GM5 515 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 COL25A1Q9BXS0 654 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SYCE3A1L190 88 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SMTNL1A8MU46 457 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MICAL2O94851 1124 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CAVIN2O95810 425 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MYL4P12829 197 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CDC25CP30307 473 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GRIK1P39086 918 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 DNAJB7Q7Z6W7 309 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SPATA17Q96L03 361 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MYADMQ96S97 322 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ARID3AQ99856 593 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LPIN3Q9BQK8 851 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF518BQ9C0D4 1074 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 EPS15L1Q9UBC2 864 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZMYM5Q9UJ78 669 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF165P49910 485 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CDR1P51861 262 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ORC1Q13415 861 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 DDR2Q16832 855 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PRSS36Q5K4E3 855 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SMYD5Q6GMV2 418 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TRIM65Q6PJ69 517 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TMC8Q8IU68 726 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GIPC2Q8TF65 315 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FGF13Q92913 245 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 JAKMIP2Q96AA8 810 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 C8orf48Q96LL4 319 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 DMAP1Q9NPF5 467 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 KRT82Q9NSB4 513 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FANCLQ9NW38 375 aa13.5□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms