RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TMEM92Q6UXU6 159 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 C1orf186Q6ZWK4 172 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 OLIG1Q8TAK6 271 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 HNRNPLLQ8WVV9 542 aaKnown RBP17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 SLC22A12Q96S37 553 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 PI4K2AQ9BTU6 479 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 BCCIPQ9P287 314 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 DSEQ9UL01 958 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 ASCC3Q8N3C0 2202 aaKnown RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 BPTFQ12830 3046 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 OPHN1O60890 802 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 PRPF40AO75400 957 aaKnown RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 CKMP06732 381 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 HNRNPLP14866 589 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 ITPKAP23677 461 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 GFPT1Q06210 699 aaPredicted RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 SMARCB1Q12824 385 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 ZNF77Q15935 545 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 ZNF423Q2M1K9 1284 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 LYSMD4Q5XG99 296 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 RAB44Q7Z6P3 723 aaPredicted RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 PYM1Q9BRP8 204 aaKnown RBP17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 SLC6A14Q9UN76 642 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 PCDHB5Q9Y5E4 795 aa17.57■□□□□ 0.4
CTDNEP1-211ENST00000575783 TRAV19A0A0A6YYK7 116 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 PIRO00625 290 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 USP17L7P0C7H9 530 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 CSH1P0DML2 217 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 CSH2P0DML3 217 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 PLS3P13797 630 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 PAX3P23760 479 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 DDR2Q16832 855 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 WSCD1Q658N2 575 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 LMBRD2Q68DH5 695 aaPredicted RBP17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 DCP1BQ8IZD4 617 aaKnown RBP17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 PGBD3Q8N328 593 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 DEFB119Q8N690 84 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 ALLCQ8N6M5 410 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 OR2I1PQ8NGU4 316 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 SH3RF2Q8TEC5 729 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 BBC3Q96PG8 261 aaPredicted RBP17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 CCDC86Q9H6F5 360 aaKnown RBP17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 KCNG1Q9UIX4 513 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 PILRBQ9UKJ0 227 aa17.56■□□□□ 0.4
CTDNEP1-211ENST00000575783 ASH1LQ9NR48 2969 aaKnown RBP17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 PP2D1A8MPX8 630 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 OPRD1P41143 372 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 LIG4P49917 911 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 PDIA5Q14554 519 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 ZRSR1Q15695 479 aaKnown RBP17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 KYAT1Q16773 422 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 ME3Q16798 604 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 TTC38Q5R3I4 469 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 ARL14EPQ8N8R7 260 aaPredicted RBP17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 PNPLA1Q8N8W4 532 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 TXNDC5Q8NBS9 432 aaKnown RBP17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 HMGB4Q8WW32 186 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 LRIG1Q96JA1 1093 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 CAMK1GQ96NX5 476 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 TSPAN18Q96SJ8 248 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 TMLHEQ9NVH6 421 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 NUP205Q92621 2012 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 THADAQ6YHU6 1953 aa17.55■□□□□ 0.4
CTDNEP1-211ENST00000575783 CITO14578 2027 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TADA3O75528 432 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 KLF8O95600 359 aaPredicted RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 NFATC1O95644 943 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 NFICP08651 508 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 GUCY2CP25092 1073 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 CDC25AP30304 524 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TIE1P35590 1138 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 DPP6P42658 865 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 MRPS21P82921 87 aaKnown RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 USP4Q13107 963 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 BYSLQ13895 437 aaKnown RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 NBR1Q14596 966 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TRIP6Q15654 476 aaKnown RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 DUOXA1Q1HG43 343 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 ZC2HC1CQ53FD0 456 aaPredicted RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 KRT79Q5XKE5 535 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 KCNK18Q7Z418 384 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 SFTPA1Q8IWL2 248 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 MINDY1Q8N5J2 469 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 C4orf32Q8N8J7 132 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 CEP76Q8TAP6 659 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TIPINQ9BVW5 301 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 POLMQ9NP87 494 aaPredicted RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 UXTQ9UBK9 157 aaPredicted RBP17.54■□□□□ 0.4
CTDNEP1-211ENST00000575783 PCDHB9Q9Y5E1 797 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms