RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 DNAI2Q9GZS0 605 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 SMYD3Q9H7B4 428 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TRPV4Q9HBA0 871 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 UXTQ9UBK9 157 aaPredicted RBP14.48□□□□□ -0.09
CIITA-210ENST00000575513 CTNND2Q9UQB3 1225 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 NME7Q9Y5B8 376 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 NUMBLQ9Y6R0 609 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TRIOO75962 3097 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TMEM221A6NGB7 291 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 M0R296 226 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 P4HA2O15460 535 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 NOL4O94818 638 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 HMGA1P17096 107 aaKnown RBP14.47□□□□□ -0.09
CIITA-210ENST00000575513 PTMSP20962 102 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 PSMC1P62191 440 aaKnown RBP14.47□□□□□ -0.09
CIITA-210ENST00000575513 WDR44Q5JSH3 913 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 PARM1Q6UWI2 310 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 RBM43Q6ZSC3 357 aaKnown RBP14.47□□□□□ -0.09
CIITA-210ENST00000575513 GAREM2Q75VX8 874 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 SHKBP1Q8TBC3 707 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 ING5Q8WYH8 240 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 FGF14Q92915 247 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 MYLPFQ96A32 169 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 ELSPBP1Q96BH3 223 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 MCRS1Q96EZ8 462 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 ASIC4Q96FT7 647 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 C8orf48Q96LL4 319 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 ASB16Q96NS5 453 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 LPIN3Q9BQK8 851 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 SRRTQ9BXP5 876 aaKnown RBP14.47□□□□□ -0.09
CIITA-210ENST00000575513 ELOVL4Q9GZR5 314 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 APOBEC3GQ9HC16 384 aaKnown RBP14.47□□□□□ -0.09
CIITA-210ENST00000575513 SLC2A4RGQ9NR83 387 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 EHD2Q9NZN4 543 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 WNT16Q9UBV4 365 aa14.47□□□□□ -0.09
CIITA-210ENST00000575513 DOCK8Q8NF50 2099 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 TRIM66O15016 1216 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CLSTN1O94985 981 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 SRFP11831 508 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 BDNFP23560 247 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 DDX6P26196 483 aaKnown RBP eCLIP14.46□□□□□ -0.09
CIITA-210ENST00000575513 GABRR2P28476 465 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CYP27A1Q02318 531 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CETN1Q12798 172 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 TEAD2Q15562 447 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 DDR2Q16832 855 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CCDC40Q4G0X9 1142 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CBWD6Q4V339 395 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 ARHGAP15Q53QZ3 475 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 DCAF17Q5H9S7 520 aaPredicted RBP14.46□□□□□ -0.09
CIITA-210ENST00000575513 MDH1BQ5I0G3 518 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CBWD3Q5JTY5 395 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 FAM78AQ5JUQ0 283 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 CBWD5Q5RIA9 395 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 SPOPLQ6IQ16 392 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 POTEHQ6S545 545 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 GIPC2Q8TF65 315 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 SEMA4DQ92854 862 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 ATXN3LQ9H3M9 355 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 DPEP3Q9H4B8 488 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 MMRN2Q9H8L6 949 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 IL21Q9HBE4 155 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 ZFP14Q9HCL3 533 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 ZNF334Q9HCZ1 680 aaPredicted RBP14.46□□□□□ -0.09
CIITA-210ENST00000575513 DACH1Q9UI36 760 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 MYO10Q9HD67 2058 aa14.46□□□□□ -0.09
CIITA-210ENST00000575513 DOCK6Q96HP0 2047 aa14.46□□□□□ -0.1
CIITA-210ENST00000575513 ATP8B3O60423 1300 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 A0A1W2PRU2 124 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 F11P03951 625 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 CCDC192P0DO97 292 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 ERCC5P28715 1186 aaPredicted RBP14.45□□□□□ -0.1
CIITA-210ENST00000575513 GRIK1P39086 918 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 RAP1GAPP47736 663 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 FMO5P49326 533 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 NDST1P52848 882 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 STX17P56962 302 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 NLRP12P59046 1061 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 CCDC142Q17RM4 750 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 SCARA5Q6ZMJ2 495 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 ZSWIM3Q96MP5 696 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 GCNAQ96QF7 691 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 NT5C1AQ9BXI3 368 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 B3GNT5Q9BYG0 378 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 TASP1Q9H6P5 420 aa14.45□□□□□ -0.1
CIITA-210ENST00000575513 FAM86C2PA6NEL3 165 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 SLC38A8A6NNN8 435 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 NRG2O14511 850 aaPredicted RBP14.44□□□□□ -0.1
CIITA-210ENST00000575513 CILPO75339 1184 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
CIITA-210ENST00000575513 ANXA13P27216 316 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 PPP3CCP48454 512 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 GPR15P49685 360 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 CDR1P51861 262 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms