RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LRRTM3Q86VH5 581 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 RASSF3Q86WH2 238 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 NT5DC4Q86YG4 428 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 KIAA1958Q8N8K9 716 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 USP33Q8TEY7 942 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 PIGKQ92643 395 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 TRMT2BQ96GJ1 504 aaKnown RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 SPACA7Q96KW9 195 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 MYRFLQ96LU7 910 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 HAPLN2Q9GZV7 340 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 POLR3BQ9NW08 1133 aaPredicted RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 MAGED2Q9UNF1 606 aaPredicted RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 PP2D1A8MPX8 630 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 KPNA7A9QM74 516 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 TDRD15B5MCY1 1934 aaKnown RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 SLC26A4O43511 780 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 NOL4O94818 638 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 NFICP08651 508 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 PFKLP17858 780 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 DHPSP49366 369 aaPredicted RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 ATXN3P54252 364 aaPredicted RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 SLC12A3P55017 1021 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 MRPS21P82921 87 aaKnown RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 RING1Q06587 406 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 ZNF77Q15935 545 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 CRY1Q16526 586 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 EML3Q32P44 896 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 WSCD1Q658N2 575 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 SLFN12LQ6IEE8 588 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 KCNK18Q7Z418 384 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 RABEPKQ7Z6M1 372 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 SYT12Q8IV01 421 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 EFCAB13Q8IY85 973 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 DEFB124Q8NES8 71 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 OLIG1Q8TAK6 271 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 CEP76Q8TAP6 659 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 LEO1Q8WVC0 666 aaPredicted RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 COL26A1Q96A83 441 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 ZNF560Q96MR9 790 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 ACBD6Q9BR61 282 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 MMTAG2Q9BU76 263 aaKnown RBP9.69□□□□□ -0.86
SMG6-218ENST00000575454 PARVGQ9HBI0 331 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 TRPC7Q9HCX4 862 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 DPP3Q9NY33 737 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 LIMCH1Q9UPQ0 1083 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 UNC79Q9P2D8 2635 aa9.69□□□□□ -0.86
SMG6-218ENST00000575454 MYMKA6NI61 221 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 K7ENM7 598 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 FAM13AO94988 1023 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 TCF3P15923 654 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 SIM1P81133 766 aaPredicted RBP9.68□□□□□ -0.86
SMG6-218ENST00000575454 MYL7Q01449 175 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 USP4Q13107 963 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 NBR1Q14596 966 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 KCNB1Q14721 858 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 NAIF1Q69YI7 327 aaPredicted RBP9.68□□□□□ -0.86
SMG6-218ENST00000575454 ADALQ6DHV7 355 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 SLC23A3Q6PIS1 610 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 TMEM86AQ8N2M4 240 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 MYCT1Q8N699 235 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 RIN3Q8TB24 985 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 SPATA18Q8TC71 538 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 SH3RF2Q8TEC5 729 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 EZH1Q92800 747 aaPredicted RBP9.68□□□□□ -0.86
SMG6-218ENST00000575454 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 PI4K2AQ9BTU6 479 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 TPSD1Q9BZJ3 242 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
SMG6-218ENST00000575454 EHD2Q9NZN4 543 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 ARHGAP26Q9UNA1 814 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 INVSQ9Y283 1065 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 WNT6Q9Y6F9 365 aa9.68□□□□□ -0.86
SMG6-218ENST00000575454 DOCK6Q96HP0 2047 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 VWA8A3KMH1 1905 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 WDR81Q562E7 1941 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 FAM221BA6H8Z2 402 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 K7EQS6 105 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 HYAL3O43820 417 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 TRAK2O60296 914 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 HUS1O60921 280 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 IL18RAPO95256 599 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 TOP3BO95985 862 aaKnown RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 HDCP19113 662 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 PCSK1P29120 753 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 EIF2DP41214 584 aaKnown RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 P2RY2P41231 377 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 MAPK8P45983 427 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 PPP3CCP48454 512 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 ACOT2P49753 483 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms