RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 WDR83Q9BRX9 315 aaKnown RBP15.1■□□□□ 0.01
SMG6-215ENST00000574501 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 DNAJB4Q9UDY4 337 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 TAGLN3Q9UI15 199 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 PCDHGA4Q9Y5G9 962 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 IGLV3-22A0A075B6J6 115 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 A0A0J9YVX5 310 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 CCDC195A0A1B0GUA6 201 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 VILLO15195 856 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 CFHP08603 1231 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 CIITAP33076 1130 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 PHBP35232 272 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 SLC25A3Q00325 362 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 GRM2Q14416 872 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 FBXL19Q6PCT2 694 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 MFSD7Q6UXD7 560 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 OGFOD1Q8N543 542 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 EXD1Q8NHP7 514 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 GDPD5Q8WTR4 605 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 POMGNT1Q8WZA1 660 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 NT5C1BQ96P26 610 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 NACC1Q96RE7 527 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 KLHL4Q9C0H6 718 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 GPAMQ9HCL2 828 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 STRIP2Q9ULQ0 834 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 SMIM31A0A1B0GVY4 71 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 DHRS4L1P0CG22 281 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 NSFP46459 744 aaKnown RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 PTP4A2Q12974 167 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 SH2D4BQ5SQS7 431 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 MEX3CQ5U5Q3 659 aaKnown RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 SLFN13Q68D06 897 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 PALM2Q8IXS6 379 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 ATP11CQ8NB49 1132 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 SNRNP27Q8WVK2 155 aaKnown RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 ALKBH8Q96BT7 664 aaKnown RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 DGCR14Q96DF8 476 aaKnown RBP15.09■□□□□ 0.01
SMG6-215ENST00000574501 ACAP3Q96P50 834 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 DHRS4Q9BTZ2 278 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 ACSS3Q9H6R3 686 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 PPCSQ9HAB8 311 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 GMEB1Q9Y692 573 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 MYPNQ86TC9 1320 aa15.09■□□□□ 0.01
SMG6-215ENST00000574501 A0A088AWK7 358 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 GAS7O60861 476 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 FKBP6O75344 327 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 PSMD10O75832 226 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 AQP5P55064 265 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 SH3BGRP55822 239 aaPredicted RBP15.08■□□□□ 0.01
SMG6-215ENST00000574501 TMED1Q13445 227 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 MYBPC2Q14324 1141 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 BBS9Q3SYG4 887 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 DNAL1Q4LDG9 190 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 KRT39Q6A163 491 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 CHSY1Q86X52 802 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 FBXO11Q86XK2 927 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0.01
SMG6-215ENST00000574501 FAM81BQ96LP2 452 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 RILPQ96NA2 401 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 AVENQ9NQS1 362 aaPredicted RBP15.08■□□□□ 0.01
SMG6-215ENST00000574501 ZDHHC7Q9NXF8 308 aa15.08■□□□□ 0.01
SMG6-215ENST00000574501 SAE1Q9UBE0 346 aaPredicted RBP15.08■□□□□ 0.01
SMG6-215ENST00000574501 MAGEB3O15480 346 aa15.08■□□□□ 0
SMG6-215ENST00000574501 ATP9BO43861 1147 aa15.08■□□□□ 0
SMG6-215ENST00000574501 RGS2P41220 211 aa15.08■□□□□ 0
SMG6-215ENST00000574501 CHN2P52757 468 aa15.08■□□□□ 0
SMG6-215ENST00000574501 EPHB1P54762 984 aa15.08■□□□□ 0
SMG6-215ENST00000574501 FAAP100Q0VG06 881 aa15.08■□□□□ 0
SMG6-215ENST00000574501 PTK7Q13308 1070 aa15.08■□□□□ 0
SMG6-215ENST00000574501 RALGPS1Q5JS13 557 aa15.08■□□□□ 0
SMG6-215ENST00000574501 FAM182AQ5T1J6 154 aa15.08■□□□□ 0
SMG6-215ENST00000574501 CES4AQ5XG92 561 aa15.08■□□□□ 0
SMG6-215ENST00000574501 CDHR3Q6ZTQ4 885 aa15.08■□□□□ 0
SMG6-215ENST00000574501 CCDC124Q96CT7 223 aaKnown RBP15.08■□□□□ 0
SMG6-215ENST00000574501 ACCSQ96QU6 501 aa15.08■□□□□ 0
SMG6-215ENST00000574501 LXNQ9BS40 222 aa15.08■□□□□ 0
SMG6-215ENST00000574501 NYXQ9GZU5 481 aa15.08■□□□□ 0
SMG6-215ENST00000574501 TMEM206Q9H813 350 aa15.08■□□□□ 0
SMG6-215ENST00000574501 SHOC2Q9UQ13 582 aa15.08■□□□□ 0
SMG6-215ENST00000574501 SBF2Q86WG5 1849 aa15.07■□□□□ 0
SMG6-215ENST00000574501 TCRBV7S3A2A0A539 114 aa15.07■□□□□ 0
SMG6-215ENST00000574501 DDX39AO00148 427 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 PDE5AO76074 875 aa15.07■□□□□ 0
SMG6-215ENST00000574501 FOSP01100 380 aaPredicted RBP15.07■□□□□ 0
SMG6-215ENST00000574501 PRELPP51888 382 aa15.07■□□□□ 0
SMG6-215ENST00000574501 HIC1Q14526 733 aa15.07■□□□□ 0
SMG6-215ENST00000574501 TRIP10Q15642 601 aa15.07■□□□□ 0
SMG6-215ENST00000574501 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 KLHL38Q2WGJ6 581 aa15.07■□□□□ 0
SMG6-215ENST00000574501 FAM91A1Q658Y4 838 aa15.07■□□□□ 0
SMG6-215ENST00000574501 KLHDC10Q6PID8 442 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PADI6Q6TGC4 694 aa15.07■□□□□ 0
SMG6-215ENST00000574501 UGT2A3Q6UWM9 527 aa15.07■□□□□ 0
SMG6-215ENST00000574501 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
SMG6-215ENST00000574501 JDP2Q8WYK2 163 aa15.07■□□□□ 0
SMG6-215ENST00000574501 APOPT1Q96IL0 206 aa15.07■□□□□ 0
SMG6-215ENST00000574501 CLMNQ96JQ2 1002 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms