RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ELOVL4Q9GZR5 314 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 SDCBP2Q9H190 292 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 UNC80Q8N2C7 3258 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 LRRN2O75325 713 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 CSH1P0DML2 217 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 CSH2P0DML3 217 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 BDNFP23560 247 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 FSHRP23945 695 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 CYP2F1P24903 491 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 SSTR3P32745 418 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 GRIK1P39086 918 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 PDZD4Q76G19 769 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 LMO3Q8TAP4 145 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 PSMG2Q969U7 264 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 JAKMIP2Q96AA8 810 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 RPGRIP1Q96KN7 1286 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 UHRF1Q96T88 793 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 CORO1BQ9BR76 489 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 FUCA2Q9BTY2 467 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 CRISPLD1Q9H336 500 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 DPEP3Q9H4B8 488 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 EHD2Q9NZN4 543 aa13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZFP37Q9Y6Q3 630 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC1-206ENST00000573989 RHOP08100 348 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 GBP2P32456 591 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 MFAP3P55082 362 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 KRT31Q15323 416 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 MIIPQ5JXC2 388 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 TTC9BQ8N6N2 239 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 SMARCD1Q96GM5 515 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 TMEM176AQ96HP8 235 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 GCNAQ96QF7 691 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 CRACR2AQ9BSW2 395 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 CEP72Q9P209 647 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 UXTQ9UBK9 157 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 CDH22Q9UJ99 828 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 NME7Q9Y5B8 376 aa13.57□□□□□ -0.24
TRAPPC1-206ENST00000573989 GOLGA6L19H0YKK7 550 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 SOAT2O75908 522 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 MICAL2O94851 1124 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 ATF6P18850 670 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 CDR1P51861 262 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLC8A3P57103 927 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZP2Q05996 745 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 NCAPHQ15003 741 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZNF394Q53GI3 561 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 GET4Q7L5D6 327 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 DNAJB7Q7Z6W7 309 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 GJD3Q8N144 294 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 CYFIP2Q96F07 1278 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 SPATA17Q96L03 361 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 ARID3AQ99856 593 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 B3GNT5Q9BYG0 378 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 VPS16Q9H269 839 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 HMGXB4Q9UGU5 601 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 NCOR1O75376 2440 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 NOTCH4Q99466 2003 aa13.56□□□□□ -0.24
TRAPPC1-206ENST00000573989 DOCK8Q8NF50 2099 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 GREB1Q4ZG55 1949 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZNF638Q14966 1978 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 LOC730098B7Z3J9 87 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 FAM200BP0CF97 657 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 MYL4P12829 197 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZNF18P17022 549 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLC9A1P19634 815 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 RFX1P22670 979 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 SP100P23497 879 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 PON1P27169 355 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 CDC25CP30307 473 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 EPHA5P54756 1037 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ORC1Q13415 861 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 DDR2Q16832 855 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms