RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 NUMBLQ9Y6R0 609 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 RGPD3A6NKT7 1758 aaPredicted RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 RGPD4Q7Z3J3 1758 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 C3orf70A6NLC5 250 aaPredicted RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 PLSCR1O15162 318 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 TM9SF1O15321 606 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ASS1P00966 412 aaKnown RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 NIPA2Q8N8Q9 360 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 DHRS4Q9BTZ2 278 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 VPS11Q9H270 941 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 MANSC1Q9H8J5 431 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ALG13Q9NP73 1137 aaKnown RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 A0A0G2JND7 137 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 EDN1P05305 212 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 SUPT20HL2P0C7V6 817 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 RPL22P35268 128 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 BBS9Q3SYG4 887 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 SUPT20HL1Q3ZLR7 823 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 BANPQ8N9N5 519 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 WDR83Q9BRX9 315 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 TLE6Q9H808 572 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 KANSL3Q9P2N6 904 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 CORO1CQ9ULV4 474 aaPredicted RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 ADGRA2Q96PE1 1338 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 EIF4E1BA6NMX2 242 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 HNRNPCL1O60812 293 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 ATP4AP20648 1035 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 PSMA2P25787 234 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 TGFB2P61812 414 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 MZB1Q8WU39 189 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 ALKBH8Q96BT7 664 aaKnown RBP16.41■□□□□ 0.22
NUP88-207ENST00000573584 SLC24A3Q9HC58 644 aa16.41■□□□□ 0.22
NUP88-207ENST00000573584 TCRBV7S3A2A0A539 114 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
NUP88-207ENST00000573584 PCK1P35558 622 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 ARL2P36404 184 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 PTDSS1P48651 473 aaKnown RBP16.4■□□□□ 0.22
NUP88-207ENST00000573584 MYL6P60660 151 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 PDIK1LQ8N165 341 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 TTC13Q8NBP0 860 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 DCAKDQ8WVC6 231 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 MIPEPQ99797 713 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 TRIM55Q9BYV6 548 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 PHACTR1Q9C0D0 580 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 DHX33Q9H6R0 707 aaKnown RBP16.4■□□□□ 0.22
NUP88-207ENST00000573584 HEY2Q9UBP5 337 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 RPL26L1Q9UNX3 145 aaKnown RBP16.4■□□□□ 0.22
NUP88-207ENST00000573584 EFR3BQ9Y2G0 817 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 STAM2O75886 525 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 WEE2P0C1S8 567 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 TFAP2BQ92481 460 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 PTPRN2Q92932 1015 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
NUP88-207ENST00000573584 CCDC22O60826 627 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 IL1R2P27930 398 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 GCKP35557 465 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 TNFSF9P41273 254 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 LRRC6Q86X45 466 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.39■□□□□ 0.21
NUP88-207ENST00000573584 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 TCHPQ9BT92 498 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 OSBPL1AQ9BXW6 950 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 DCLRE1BQ9H816 532 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 ZNF302Q9NR11 478 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 XPO7Q9UIA9 1087 aaKnown RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 E7ESA3 106 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 TMEM63AO94886 807 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 MT-ND3P03897 115 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 OATP04181 439 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 KRT7P08729 469 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 KRT3P12035 628 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 SP2Q02086 613 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 SLC25A11Q02978 314 aaKnown RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 GNPTABQ3T906 1256 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 CIAPIN1Q6FI81 312 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 BBS12Q6ZW61 710 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 KCNN1Q92952 543 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 TSSK1BQ9BXA7 367 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 CADM1Q9BY67 442 aaKnown RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 LPXNO60711 386 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 LRCH4O75427 683 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 HAUS5O94927 633 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms