RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 H3BQV1 296 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 LAD1O00515 517 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 HCRTO43612 131 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SP9P0CG40 484 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 MYL4P12829 197 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 PCSK2P16519 638 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 MAPK1P28482 360 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 MARCKSP29966 332 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 MATR3P43243 847 aaKnown RBP eCLIP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SOX9P48436 509 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 STARD6P59095 220 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 CTBSQ01459 385 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 FZD5Q13467 585 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 TEAD2Q15562 447 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 JADE1Q6IE81 842 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 ELMSAN1Q6PJG2 1045 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 TMC8Q8IU68 726 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 OR10T2Q8NGX3 314 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 ZNF461Q8TAF7 563 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SHKBP1Q8TBC3 707 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 UROC1Q96N76 676 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 CLIC6Q96NY7 704 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 NTPCRQ9BSD7 190 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 RBCK1Q9BYM8 510 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 ZHX3Q9H4I2 956 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 LTB4R2Q9NPC1 389 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 C2orf42Q9NWW7 574 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 TBX20Q9UMR3 447 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 SIT1Q9Y3P8 196 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 ANAPC1Q9H1A4 1944 aa10.03□□□□□ -0.8
NPLOC4-210ENST00000572824 PTPRDP23468 1912 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 GREB1Q4ZG55 1949 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 VPS37CA5D8V6 355 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 HNRNPDLO14979 420 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 SYN3O14994 580 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 C1RP00736 705 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 LRG1P02750 347 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 POU2F2P09086 479 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 CPB1P15086 417 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ATF2P15336 505 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ACOT2P49753 483 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 CASP5P51878 434 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ZNF131P52739 623 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 STRN3Q13033 797 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 PTPAQ15257 358 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ZBTB6Q15916 424 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ZNF280DQ6N043 979 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 VITQ6UXI7 678 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 SFR1Q86XK3 245 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 EFCAB13Q8IY85 973 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 TCEAL8Q8IYN2 117 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 MYCT1Q8N699 235 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ATAD1Q8NBU5 361 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 TTC8Q8TAM2 541 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 RAD54LQ92698 747 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 CDK5RAP3Q96JB5 506 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 ZFYVE19Q96K21 471 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 LRRC3BQ96PB8 259 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 LRRC3Q9BY71 257 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 SMG9Q9H0W8 520 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 SLC38A7Q9NVC3 462 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 TBC1D7Q9P0N9 293 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 NDRG2Q9UN36 371 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 SMC3Q9UQE7 1217 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 KIAA1549LQ6ZVL6 1849 aa10.02□□□□□ -0.81
NPLOC4-210ENST00000572824 MTMR11A4FU01 709 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 FAM170BA6NMN3 283 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 M0QZQ0 153 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 CLDN3O15551 220 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 PRAMEF12O95522 483 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 LRPAP1P30533 357 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 AARSP49588 968 aaKnown RBP eCLIP10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 GPR15P49685 360 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 LIG4P49917 911 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 DUSP4Q13115 394 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 RESTQ13127 1097 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 UVSSAQ2YD98 709 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 LARP1BQ659C4 914 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 PDXDC1Q6P996 788 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 ZPBP2Q6X784 338 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 MTSS1LQ765P7 747 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 DYMQ7RTS9 669 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 C1orf210Q8IVY1 113 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 KIAA2013Q8IYS2 634 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 GLIS3Q8NEA6 775 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 RIN3Q8TB24 985 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 IRF7Q92985 503 aa10.01□□□□□ -0.81
NPLOC4-210ENST00000572824 NXPE3Q969Y0 559 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms