RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ZDHHC5Q9C0B5 715 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 FAM124BQ9H5Z6 455 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-208ENST00000572270 TRPC7Q9HCX4 862 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 MAGED2Q9UNF1 606 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-208ENST00000572270 CFAP46Q8IYW2 2715 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 TSC2P49815 1807 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 CBFA2T3O75081 653 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 CKMP06732 381 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 USP17L7P0C7H9 530 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 XBP1P17861 261 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 ITPKBP27987 946 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 PDIA3P30101 505 aaKnown RBP14.14□□□□□ -0.15
CCDC40-208ENST00000572270 LRPAP1P30533 357 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 OPRD1P41143 372 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 TXKP42681 527 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
CCDC40-208ENST00000572270 MPZL3Q6UWV2 235 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 IL17RCQ8NAC3 791 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 SPPL2BQ8TCT7 592 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 KIFAP3Q92845 792 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 HSPA12BQ96MM6 686 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
CCDC40-208ENST00000572270 TMEM206Q9H813 350 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 PTPRHQ9HD43 1115 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 TUFT1Q9NNX1 390 aa14.14□□□□□ -0.15
CCDC40-208ENST00000572270 MUC22E2RYF6 1773 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-208ENST00000572270 HELZP42694 1942 aaKnown RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 TRAV19A0A0A6YYK7 116 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 TEX51A0A1B0GUA7 166 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 ANTXRLA6NF34 631 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 MYMKA6NI61 221 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 GOLGA8CPA6NN73 597 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 CCDC169A6NNP5 214 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 E9PAM4 449 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 RRP8O43159 456 aaKnown RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 XPOTO43592 962 aaKnown RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 APODP05090 189 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 CSH1P0DML2 217 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 CSH2P0DML3 217 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 CDR1P51861 262 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 KCNC4Q03721 635 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 GRIK2Q13002 908 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 SLC10A6Q3KNW5 377 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 SYCP2LQ5T4T6 812 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 MARCH9Q86YJ5 346 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 FBXL16Q8N461 479 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 TRIML1Q8N9V2 468 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 OR10T2Q8NGX3 314 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 CDC6Q99741 560 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 TARS2Q9BW92 718 aaKnown RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 UXTQ9UBK9 157 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-208ENST00000572270 HECTD1Q9ULT8 2610 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
CCDC40-208ENST00000572270 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-208ENST00000572270 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 HAPLN1P10915 354 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-208ENST00000572270 HLA-EP13747 358 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 SMARCB1Q12824 385 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 CAMK2BQ13554 666 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 GPR155Q7Z3F1 870 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 SPATA18Q8TC71 538 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
CCDC40-208ENST00000572270 AGXT2Q9BYV1 514 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 ZCWPW1Q9H0M4 648 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 TMEM134Q9H6X4 195 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
CCDC40-208ENST00000572270 UBQLN1Q9UMX0 589 aaKnown RBP14.12□□□□□ -0.15
CCDC40-208ENST00000572270 FAM149AA5PLN7 773 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 NEMFO60524 1076 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 ATXN1LP0C7T5 689 aaKnown RBP14.11□□□□□ -0.15
CCDC40-208ENST00000572270 HMGA1P17096 107 aaKnown RBP14.11□□□□□ -0.15
CCDC40-208ENST00000572270 CYP3A5P20815 502 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 PROZP22891 400 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 SPAG1Q07617 926 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 NOLC1Q14978 699 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC40-208ENST00000572270 METTL23Q86XA0 190 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 TMEM130Q8N3G9 435 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 SH3RF2Q8TEC5 729 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 NXPE2Q96DL1 559 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 SENP8Q96LD8 212 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 PNKPQ96T60 521 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 LINC00597Q9H2U6 94 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 PLEKHA5Q9HAU0 1116 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 POLD4Q9HCU8 107 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 TOR4AQ9NXH8 423 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 CALCOCO1Q9P1Z2 691 aa14.11□□□□□ -0.15
CCDC40-208ENST00000572270 ANK1P16157 1881 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 NDUFS2O75306 463 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 ZNF217O75362 1048 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 MED24O75448 989 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 DKK1O94907 266 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 KAT7O95251 611 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 CER1O95813 267 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 CXCL8P10145 99 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 RPS6KB1P23443 525 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms