RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 DDR2Q16832 855 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 ADALQ6DHV7 355 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 KDF1Q8NAX2 398 aaPredicted RBP21.39■■□□□ 1.01
CCDC40-206ENST00000572083 LRRC15Q8TF66 581 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 ATP2A3Q93084 1043 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 CYP2S1Q96SQ9 504 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 TMEM121BQ9BXQ6 578 aaPredicted RBP21.39■■□□□ 1.01
CCDC40-206ENST00000572083 CCSER1Q9C0I3 900 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 ZHX3Q9H4I2 956 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 ASB7Q9H672 318 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 PARVGQ9HBI0 331 aa21.39■■□□□ 1.01
CCDC40-206ENST00000572083 KPNA7A9QM74 516 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 TRAK2O60296 914 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 CKMP06732 381 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 BCKDHBP21953 392 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 ZNF131P52739 623 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 USP4Q13107 963 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 EML3Q32P44 896 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 SV2CQ496J9 727 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 MCTP1Q6DN14 999 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 CYP2U1Q7Z449 544 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 EFCAB13Q8IY85 973 aa21.38■■□□□ 1.01
CCDC40-206ENST00000572083 ABCA7Q8IZY2 2146 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 SOBPA7XYQ1 873 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 KHNYNO15037 678 aaKnown RBP21.37■■□□□ 1.01
CCDC40-206ENST00000572083 SCP2P22307 547 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 SEC13P55735 322 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 CCDC142Q17RM4 750 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 USP39Q53GS9 565 aaKnown RBP21.37■■□□□ 1.01
CCDC40-206ENST00000572083 ANO7Q6IWH7 933 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 FIZ1Q96SL8 496 aa21.37■■□□□ 1.01
CCDC40-206ENST00000572083 UXTQ9UBK9 157 aaPredicted RBP21.37■■□□□ 1.01
CCDC40-206ENST00000572083 AGO2Q9UKV8 859 aaKnown RBP21.37■■□□□ 1.01
CCDC40-206ENST00000572083 THADAQ6YHU6 1953 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 ANTXRLA6NF34 631 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 TULP1O00294 542 aaPredicted RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 CDX4O14627 284 aaPredicted RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 SEC24BO95487 1268 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 KRT18P05783 430 aaKnown RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 USP17L7P0C7H9 530 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 CEACAM1P13688 526 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 ACAT1P24752 427 aaKnown RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 CYP2F1P24903 491 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 GTF2BQ00403 316 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 NFE2Q16621 373 aaPredicted RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 UAP1L1Q3KQV9 507 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 ZC2HC1CQ53FD0 456 aaPredicted RBP21.36■■□□□ 1.01
CCDC40-206ENST00000572083 ZNF560Q96MR9 790 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 SCNM1Q9BWG6 230 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 IKZF4Q9H2S9 585 aa21.36■■□□□ 1.01
CCDC40-206ENST00000572083 TRAV19A0A0A6YYK7 116 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 NOL4O94818 638 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 CSRP1P21291 193 aaKnown RBP21.35■■□□□ 1.01
CCDC40-206ENST00000572083 DHPSP49366 369 aaPredicted RBP21.35■■□□□ 1.01
CCDC40-206ENST00000572083 C2orf27AQ580R0 203 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 RILPL1Q5EBL4 403 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 KIAA1211LQ6NV74 962 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 C11orf74Q86VG3 221 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 TTC30AQ86WT1 665 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 PDCL2Q8N4E4 241 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 DEFB124Q8NES8 71 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 MDGA1Q8NFP4 955 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 USP33Q8TEY7 942 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 LEO1Q8WVC0 666 aaPredicted RBP21.35■■□□□ 1.01
CCDC40-206ENST00000572083 GATA6Q92908 595 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 TRMT2BQ96GJ1 504 aaKnown RBP21.35■■□□□ 1.01
CCDC40-206ENST00000572083 ZSCAN31Q96LW9 406 aaPredicted RBP21.35■■□□□ 1.01
CCDC40-206ENST00000572083 TMEM206Q9H813 350 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 L1RE1Q9UN81 338 aa21.35■■□□□ 1.01
CCDC40-206ENST00000572083 DMXL2Q8TDJ6 3036 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 LAMA5O15230 3695 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 C2orf78A6NCI8 922 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 TBCAO75347 108 aaKnown RBP21.34■■□□□ 1.01
CCDC40-206ENST00000572083 RPL10AP62906 217 aaKnown RBP21.34■■□□□ 1.01
CCDC40-206ENST00000572083 IRX4P78413 519 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 MCM6Q14566 821 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 CRELD2Q6UXH1 353 aaPredicted RBP21.34■■□□□ 1.01
CCDC40-206ENST00000572083 ARL14EPQ8N8R7 260 aaPredicted RBP21.34■■□□□ 1.01
CCDC40-206ENST00000572083 SH3RF2Q8TEC5 729 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 PIGKQ92643 395 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 LINC00597Q9H2U6 94 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 BLOC1S4Q9NUP1 217 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 DDX43Q9NXZ2 648 aaKnown RBP21.34■■□□□ 1.01
CCDC40-206ENST00000572083 PKD1L2Q7Z442 2459 aa21.34■■□□□ 1.01
CCDC40-206ENST00000572083 HELZP42694 1942 aaKnown RBP21.33■■□□□ 1.01
CCDC40-206ENST00000572083 K7EQS6 105 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 POLR2BP30876 1174 aaKnown RBP21.33■■□□□ 1.01
CCDC40-206ENST00000572083 NR1H3Q13133 447 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 INTS6LQ5JSJ4 861 aaKnown RBP21.33■■□□□ 1.01
CCDC40-206ENST00000572083 RASSF3Q86WH2 238 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 CCDC33Q8N5R6 958 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 CALML4Q96GE6 196 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 CNOT6LQ96LI5 555 aaKnown RBP21.33■■□□□ 1.01
CCDC40-206ENST00000572083 MYRFLQ96LU7 910 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 ABCB6Q9NP58 842 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 GTF3C4Q9UKN8 822 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 CIZ1Q9ULV3 898 aaPredicted RBP21.33■■□□□ 1.01
CCDC40-206ENST00000572083 STYXL1Q9Y6J8 313 aa21.33■■□□□ 1.01
CCDC40-206ENST00000572083 FREM2Q5SZK8 3169 aa21.33■■□□□ 1
CCDC40-206ENST00000572083 ANAPC1Q9H1A4 1944 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms