RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 NUDT5Q9UKK9 219 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-206ENST00000571995 E5RJQ4 531 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 GPR25O00155 361 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 LYPLA2O95372 231 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 TTC4O95801 387 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 ARL1P40616 181 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-206ENST00000571995 BRSK2Q8IWQ3 736 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 USP33Q8TEY7 942 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 RXFP2Q8WXD0 754 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 APOL2Q9BQE5 337 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 ABCF3Q9NUQ8 709 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 MYBL1P10243 752 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 PTGIRP43119 386 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 FNTAP49354 379 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 ITKQ08881 620 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 AGBL2Q5U5Z8 902 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 SIX6OS1Q8N1H7 587 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.31
RAB40B-206ENST00000571995 SLCO1B3Q9NPD5 702 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 FIS1Q9Y3D6 152 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 GON4LQ3T8J9 2241 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 C11orf97A0A1B0GVM6 126 aaPredicted RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 CPP00450 1065 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 LGALS2P05162 132 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 HNRNPH1P31943 449 aaKnown RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 ZNF280AP59817 542 aaPredicted RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 PTPN20Q4JDL3 420 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 ARHGEF18Q6ZSZ5 1173 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 EXOC3L1Q86VI1 746 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 CYP4X1Q8N118 509 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 MAML1Q92585 1016 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 NPHS2Q9NP85 383 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 TSPAN16Q9UKR8 245 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 MYPNQ86TC9 1320 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 ASB14A6NK59 587 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 AGTP01019 485 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 KRT4P19013 534 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 PDE1BQ01064 536 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 GNASQ5JWF2 1037 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 DNERQ8NFT8 737 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 RUBCNQ92622 972 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
RAB40B-206ENST00000571995 CPXM1Q96SM3 734 aa17■□□□□ 0.31
RAB40B-206ENST00000571995 PPFIA2O75334 1257 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 NAA25Q14CX7 972 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 B3GNT9Q6UX72 402 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 TRIM72Q6ZMU5 477 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 GBP1P32455 592 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 SKOR1P84550 965 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 BMPR2Q13873 1038 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 RAB6CQ53S08 254 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 CELF3Q5SZQ8 465 aaKnown RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 CRELD2Q6UXH1 353 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 NT5C1AQ9BXI3 368 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 RAB6CQ9H0N0 254 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 TRAPPC3O43617 180 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 HUS1O60921 280 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 CCDC130P13994 396 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 CRADDP78560 199 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 LMNB2Q03252 620 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-206ENST00000571995 RBPJLQ9UBG7 517 aa16.99■□□□□ 0.31
RAB40B-206ENST00000571995 ARF4P18085 180 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-206ENST00000571995 MIPP30301 263 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 ARL4CP56559 192 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 ABCG1P45844 678 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 CES3Q6UWW8 571 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 FBXO36Q8NEA4 188 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 MORC4Q8TE76 937 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 PCYT2Q99447 389 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 GPR20Q99678 358 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 GCOM2Q9BZD3 368 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-206ENST00000571995 UNKQ9C0B0 810 aaKnown RBP16.98■□□□□ 0.31
RAB40B-206ENST00000571995 ETNK1Q9HBU6 452 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 UBP1Q9NZI7 540 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 MYO18AQ92614 2054 aaKnown RBP16.98■□□□□ 0.31
RAB40B-206ENST00000571995 CDH16O75309 829 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 UBOX5O94941 541 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 ALDH3A1P30838 453 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 RBP5P82980 135 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 OGDHQ02218 1023 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 TNFAIP2Q03169 654 aa16.98■□□□□ 0.31
RAB40B-206ENST00000571995 ZC3H12AQ5D1E8 599 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms