RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 MTMR2Q13614 643 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 KPNB1Q14974 876 aaKnown RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 TMCO4Q5TGY1 634 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 KLC3Q6P597 504 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 RYBPQ8N488 228 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 CERS5Q8N5B7 392 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 PGBD4Q96DM1 585 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 CMTM5Q96DZ9 223 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 METTL5Q9NRN9 209 aaKnown RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 SHOC2Q9UQ13 582 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 RGL2O15211 777 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 XRCC4Q13426 336 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 PTK6Q13882 451 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 ARL13BQ3SXY8 428 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 WASHC2DQ5SRD0 308 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 CATSPER4Q7RTX7 472 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 RASGEF1CQ8N431 466 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 STK32AQ8WU08 396 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 PPP1R36Q96LQ0 422 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 PDP2Q9P2J9 529 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 ZNF70Q9UC06 446 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 NEMP1O14524 444 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 MEIS2O14770 477 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 SSTR1P30872 391 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 CLMNQ96JQ2 1002 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 FAM49AQ9H0Q0 323 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 AGAP1Q9UPQ3 857 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
PCDHGA4-201ENST00000571252 MAFGO15525 162 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ATP9BO43861 1147 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 RASA2Q15283 850 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 SHROOM1Q2M3G4 852 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 RSBN1LQ6PCB5 846 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 TCP10LQ8TDR4 215 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 CCDC138Q96M89 665 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 AGAP3Q96P47 875 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 TMEM120AQ9BXJ8 343 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 PCDH9Q9HC56 1237 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 DNM1LO00429 736 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 TGFB1I1O43294 461 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 UNC5CO95185 931 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ICAM1P05362 532 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 GNAT1P11488 350 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 CYTH1Q15438 398 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 RNPEPL1Q9HAU8 725 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 PAPOLBQ9NRJ5 636 aaKnown RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 RNF103-CHMP3A0A140T963 221 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 AIM2O14862 343 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 MAP3K6O95382 1288 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 MYCP01106 439 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 ENO3P13929 434 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 BGNP21810 368 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 HMGCS2P54868 508 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 KIF19Q2TAC6 998 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 MFSD7Q6UXD7 560 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 SCUBE1Q8IWY4 988 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 LRRC57Q8N9N7 239 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 AVENQ9NQS1 362 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 STAP1Q9ULZ2 295 aa11.61□□□□□ -0.55
PCDHGA4-201ENST00000571252 CYP3A7-CYP3A51PA0A087WV96 503 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 SPATA31C1P0DKV0 1188 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 MAPTP10636 758 aaKnown RBP11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 TAC1P20366 129 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 CYP3A7P24462 503 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 CHRNA5P30532 468 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 GCNT1Q02742 428 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 HYIQ5T013 277 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 ZNF572Q7Z3I7 529 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 APLFQ8IW19 511 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 C4orf19Q8IY42 314 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 ZNF75CPQ92670 426 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 EXT2Q93063 718 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 A8MXQ7 604 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 TM9SF1O15321 606 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 PYGBP11216 843 aa11.6□□□□□ -0.55
PCDHGA4-201ENST00000571252 PPATQ06203 517 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms