RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 AKAP3O75969 853 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FGF19O95750 216 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FAM163BP0C2L3 166 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TRIM49P0CI25 452 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TRIM49CP0CI26 452 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 CSH1P0DML2 217 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 CSH2P0DML3 217 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 PSMC3P17980 439 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 PTPN1P18031 435 aaKnown RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 BDNFP23560 247 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 NR2F2P24468 414 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 WEE1P30291 646 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ATICP31939 592 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 GNL1P36915 607 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 MAGEA11P43364 429 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SOX9P48436 509 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 CACNA2D1P54289 1103 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 CDH8P55286 799 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 RPL10AP62906 217 aaKnown RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 TNNC1P63316 161 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 PPP3CAQ08209 521 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FZD5Q13467 585 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 BIRC3Q13489 604 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TRPC3Q13507 836 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ANGPT1Q15389 498 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TAF12Q16514 161 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 NFIL3Q16649 462 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ZNF699Q32M78 642 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 WDR72Q3MJ13 1102 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ZACNQ401N2 412 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 CFAP221Q4G0U5 840 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ARHGAP15Q53QZ3 475 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 MDH1BQ5I0G3 518 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TXNDC8Q6A555 127 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SPOPLQ6IQ16 392 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SCARA5Q6ZMJ2 495 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SV2AQ7L0J3 742 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 MON1AQ86VX9 555 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SPATA2LQ8IUW3 424 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 MAML2Q8IZL2 1156 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 ZNF687Q8N1G0 1237 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 GUF1Q8N442 669 aaKnown RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 OR6B3Q8NGW1 331 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 TMC2Q8TDI7 906 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ERCC4Q92889 916 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 CCDC47Q96A33 483 aaKnown RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 SYAP1Q96A49 352 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 E2F7Q96AV8 911 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 PCED1BQ96HM7 432 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FUBP3Q96I24 572 aaKnown RBP eCLIP5.78□□□□□ -1.48
CHD3-212ENST00000570758 SHDQ96IW2 340 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 ZFYVE19Q96K21 471 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 GCNAQ96QF7 691 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 B3GNT5Q9BYG0 378 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 IRF2BPLQ9H1B7 796 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 SNX25Q9H3E2 840 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 BRD9Q9H8M2 597 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 VRTNQ9H8Y1 702 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 LTB4R2Q9NPC1 389 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.78□□□□□ -1.48
CHD3-212ENST00000570758 TMEM30AQ9NV96 361 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 MAGEC2Q9UBF1 373 aaPredicted RBP5.78□□□□□ -1.48
CHD3-212ENST00000570758 CCL26Q9Y258 94 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 FRMD4BQ9Y2L6 1034 aa5.78□□□□□ -1.48
CHD3-212ENST00000570758 A8MXQ7 604 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 PROB1E7EW31 1015 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 DPYSL4O14531 572 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MAPK13O15264 365 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 CHADO15335 359 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 GADD45BO75293 160 aaPredicted RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 KIF20AO95235 890 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 HLA-DRAP01903 254 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 CCNE1P24864 410 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 GRIK1P39086 918 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 PIK3CAP42336 1068 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 PRCPP42785 496 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 GCLMP48507 274 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 VAMP7P51809 220 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 AP3M2P53677 418 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 USP46P62068 366 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 CYP27A1Q02318 531 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 FAM160A1Q05DH4 1040 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 TNK2Q07912 1038 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 FCHO2Q0JRZ9 810 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 ORC1Q13415 861 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MAPRE1Q15691 268 aaKnown RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 ZNF667Q5HYK9 610 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 WDR44Q5JSH3 913 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 VSTM1Q6UX27 236 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 ZNF852Q6ZMS4 543 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 C4orf50Q6ZRC1 276 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 PAQR9Q6ZVX9 377 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 ASCL5Q7RTU5 278 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 C1orf210Q8IVY1 113 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 YAF2Q8IY57 180 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 FAM186BQ8IYM0 893 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 CMTM8Q8IZV2 173 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MAB21L3Q8N8X9 362 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms