RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PLK5Q496M5 336 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 PSAPL1Q6NUJ1 521 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 CC2D1AQ6P1N0 951 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-220ENST00000569827 KCNN1Q92952 543 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 FAM213AQ9BRX8 229 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 TPSD1Q9BZJ3 242 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 DUSP15Q9H1R2 295 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-220ENST00000569827 ASB7Q9H672 318 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 DDX43Q9NXZ2 648 aaKnown RBP12.99□□□□□ -0.33
CAPN3-220ENST00000569827 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 AGAP1Q9UPQ3 857 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-220ENST00000569827 C2orf78A6NCI8 922 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 CKMP06732 381 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 SPINK2P20155 84 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 GBP1P32455 592 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 CASP5P51878 434 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 LIMK1P53667 647 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 PSMC1P62191 440 aaKnown RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 DMC1Q14565 340 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 ZNF77Q15935 545 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 MON1AQ86VX9 555 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 TTC30AQ86WT1 665 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 SFTPA1Q8IWL2 248 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 SCN4BQ8IWT1 228 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 DCP1BQ8IZD4 617 aaKnown RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 ARL14EPQ8N8R7 260 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 C1orf127Q8N9H9 656 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 AK8Q96MA6 479 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 EDEM2Q9BV94 578 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 ECT2Q9H8V3 914 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 ZDHHC4Q9NPG8 344 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 DUS2Q9NX74 493 aaKnown RBP12.98□□□□□ -0.33
CAPN3-220ENST00000569827 GTF3C4Q9UKN8 822 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 STYXL1Q9Y6J8 313 aa12.98□□□□□ -0.33
CAPN3-220ENST00000569827 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PATE3B3GLJ2 98 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 ATP2C2O75185 946 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PPP1R37O75864 691 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 KCNK5O95279 499 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 KRT19P08727 400 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 CSH1P0DML2 217 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 CSH2P0DML3 217 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 BCKDHBP21953 392 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 IFNAR2P48551 515 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 USP4Q13107 963 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PTPAQ15257 358 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 EML3Q32P44 896 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 INTS6LQ5JSJ4 861 aaKnown RBP12.97□□□□□ -0.33
CAPN3-220ENST00000569827 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 CPA6Q8N4T0 437 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 CD101Q93033 1021 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 LOXL4Q96JB6 756 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PKMYT1Q99640 499 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 LINC00597Q9H2U6 94 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PCIF1Q9H4Z3 704 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 KIF9Q9HAQ2 790 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 BAHCC1Q9P281 2608 aa12.97□□□□□ -0.33
CAPN3-220ENST00000569827 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 MYMKA6NI61 221 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 ATG13O75143 517 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 NOL4O94818 638 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
CAPN3-220ENST00000569827 DRD1P21728 446 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 DDX6P26196 483 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPN3-220ENST00000569827 DGKEP52429 567 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 C2orf27AQ580R0 203 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 SLFN12LQ6IEE8 588 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 ANO7Q6IWH7 933 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 CCDC33Q8N5R6 958 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 CSGALNACT2Q8N6G5 542 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
CAPN3-220ENST00000569827 SH3RF2Q8TEC5 729 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 CBWD1Q9BRT8 395 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
CAPN3-220ENST00000569827 PDE11AQ9HCR9 933 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 SIX4Q9UIU6 781 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 CLIC4Q9Y696 253 aa12.96□□□□□ -0.33
CAPN3-220ENST00000569827 TRAV19A0A0A6YYK7 116 aa12.95□□□□□ -0.34
CAPN3-220ENST00000569827 CCDC163A0A0D9SF12 145 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms