RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ZBTB10Q96DT7 871 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 MCRS1Q96EZ8 462 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM176AQ96HP8 235 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 HPDLQ96IR7 371 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ATP6V1G3Q96LB4 118 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RUFY1Q96T51 708 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 C11orf70Q9BRQ4 267 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TRIM51Q9BSJ1 452 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 FRMD8P1Q9BZ68 369 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 OSBPL8Q9BZF1 889 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 FOXP3Q9BZS1 431 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ROPN1BQ9BZX4 212 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ELOVL4Q9GZR5 314 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 MIS12Q9H081 205 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 SDCBP2Q9H190 292 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 EPB41L4BQ9H329 900 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ROPN1Q9HAT0 212 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 DPP3Q9NY33 737 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 MTRF1LQ9UGC7 380 aaKnown RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 BARX2Q9UMQ3 279 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 POLIQ9UNA4 740 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 AKT3Q9Y243 479 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 PLAAQ9Y263 795 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CEP83Q9Y592 693 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ANKRD33BA6NCL7 494 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 NDC80O14777 642 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 TCEA3O75764 348 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 TJP3O95049 919 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 GAS8O95995 478 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 KRT14P02533 472 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 VTNP04004 478 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 KRT3P12035 628 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 DARSP14868 501 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 KCNE1P15382 129 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CD58P19256 250 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 BRD2P25440 801 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 HOXC8P31273 242 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 GPD2P43304 727 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 KCNJ1P48048 391 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 LMAN1P49257 510 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CDH8P55286 799 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 OSTNP61366 133 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 NKX3-2P78367 333 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 OGDHQ02218 1023 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PTPN11Q06124 597 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 SREBF2Q12772 1141 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CBLBQ13191 982 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 BYSLQ13895 437 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CCDC142Q17RM4 750 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 TNFAIP8L3Q5GJ75 292 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CEP85LQ5SZL2 805 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 C6orf118Q5T5N4 469 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 DCUN1D2Q6PH85 259 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 LRRC31Q6UY01 552 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 RNF19BQ6ZMZ0 732 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 TRMT10CQ7L0Y3 403 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 LIMS2Q7Z4I7 341 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 UNC93AQ86WB7 457 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 RNF135Q8IUD6 432 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PASD1Q8IV76 773 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PHTF2Q8N3S3 785 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 ARFGAP2Q8N6H7 521 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 LRRC52Q8N7C0 313 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CCDC89Q8N998 374 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PLPP7Q8NBV4 271 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 FBXO25Q8TCJ0 367 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 C1orf54Q8WWF1 131 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CENPTQ96BT3 561 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PGM2Q96G03 612 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 RBM41Q96IZ5 413 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 SLITRK1Q96PX8 696 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 NCAPGQ9BPX3 1015 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 ADPGKQ9BRR6 497 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CAPS2Q9BXY5 557 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 DPH5Q9H2P9 285 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 PLEKHA4Q9H4M7 779 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 SETD4Q9NVD3 440 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 CALCOCO1Q9P1Z2 691 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 GJD2Q9UKL4 321 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 ABT1Q9ULW3 272 aaKnown RBP5.68□□□□□ -1.5
SF3B3-213ENST00000569687 AGAP1Q9UPQ3 857 aa5.68□□□□□ -1.5
SF3B3-213ENST00000569687 GOLGA6L10A6NI86 522 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 C3orf70A6NLC5 250 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 F8VP50 259 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 O00370 1275 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PIRO00625 290 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 EIF3HO15372 352 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ADCY6O43306 1168 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CSDE1O75534 798 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 MICAL2O94851 1124 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ENDOD1O94919 500 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms