RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 ZNF507Q8TCN5 953 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 MRPS31Q92665 395 aaKnown RBP17.15■□□□□ 0.34
EPB42-208ENST00000569204 GKN1Q9NS71 199 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 UXTQ9UBK9 157 aaPredicted RBP17.15■□□□□ 0.34
EPB42-208ENST00000569204 CCL26Q9Y258 94 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 DCHS1Q96JQ0 3298 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
EPB42-208ENST00000569204 PTPRDP23468 1912 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 NOL4O94818 638 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 PAPSS2O95340 614 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 CCINQ13939 588 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 PUM1Q14671 1186 aaKnown RBP eCLIP17.14■□□□□ 0.33
EPB42-208ENST00000569204 CCDC142Q17RM4 750 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 FAM26FQ5R3K3 315 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 Q6ZS52 159 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 MON1AQ86VX9 555 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 SPATA2LQ8IUW3 424 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 USP13Q92995 863 aaPredicted RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 TRMT2BQ96GJ1 504 aaKnown RBP17.14■□□□□ 0.33
EPB42-208ENST00000569204 FUBP3Q96I24 572 aaKnown RBP eCLIP17.14■□□□□ 0.33
EPB42-208ENST00000569204 HPDLQ96IR7 371 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 MYRFLQ96LU7 910 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 FAM83CQ9BQN1 747 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 KIF9Q9HAQ2 790 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
EPB42-208ENST00000569204 TGFB1I1O43294 461 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 TADA3O75528 432 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 RUNX3Q13761 415 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 FAM171BQ6P995 826 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 WDR49Q8IV35 697 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 SYNPOQ8N3V7 929 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 HPS4Q9NQG7 708 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 GMEB2Q9UKD1 530 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 RAB23Q9ULC3 237 aa17.13■□□□□ 0.33
EPB42-208ENST00000569204 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 HELZP42694 1942 aaKnown RBP17.12■□□□□ 0.33
EPB42-208ENST00000569204 K7ESF4 209 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 PDIA4P13667 645 aaKnown RBP17.12■□□□□ 0.33
EPB42-208ENST00000569204 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
EPB42-208ENST00000569204 TRIM68Q6AZZ1 485 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 DGLUCYQ7Z3D6 616 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 SCN4BQ8IWT1 228 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 SYT15Q9BQS2 421 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 MAGEF1Q9HAY2 307 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 AGPAT3Q9NRZ7 376 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 DLL3Q9NYJ7 618 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 UBE4BO95155 1302 aa17.12■□□□□ 0.33
EPB42-208ENST00000569204 CHURC1-FNTBB4DL54 471 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 ATP2C2O75185 946 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 LMO2P25791 158 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 MAGEA11P43364 429 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 FNTBP49356 437 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 SNRPFP62306 86 aaKnown RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 EHHADHQ08426 723 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 DMWDQ09019 674 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 SNRNP35Q16560 246 aaKnown RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 LPAL2Q16609 132 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 RSPO4Q2I0M5 234 aaPredicted RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 CC2D1AQ6P1N0 951 aaPredicted RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 SCFD1Q8WVM8 642 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 C2orf42Q9NWW7 574 aa17.11■□□□□ 0.33
EPB42-208ENST00000569204 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
EPB42-208ENST00000569204 OTOL1A6NHN0 477 aaPredicted RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 CLIC2O15247 247 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 TNNI1P19237 187 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 TGM1P22735 817 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 CASP1P29466 404 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 CNR2P34972 360 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 FAM160A1Q05DH4 1040 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 SIM2Q14190 667 aaPredicted RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 PSMD6Q15008 389 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 PDGFRLQ15198 375 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
EPB42-208ENST00000569204 TMEM196Q5HYL7 178 aa17.1■□□□□ 0.33
EPB42-208ENST00000569204 LAIR1Q6GTX8 287 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms