RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 EIF2DP41214 584 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 SEC13P55735 322 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 FAM193AP78312 1265 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 RPL6Q02878 288 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 MCL1Q07820 350 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 NR5A1Q13285 461 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 TRIM29Q14134 588 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 ZNF77Q15935 545 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 EML3Q32P44 896 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 EARS2Q5JPH6 523 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 TOGARAM2Q6ZUX3 1019 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 NAXDQ8IW45 347 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 EFCAB13Q8IY85 973 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 CCDC33Q8N5R6 958 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 MDM1Q8TC05 714 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 SPATA18Q8TC71 538 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 RLN3Q8WXF3 142 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 NTPCRQ9BSD7 190 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 RAB34Q9BZG1 259 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 ORC3Q9UBD5 711 aaPredicted RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 DNM3Q9UQ16 869 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 PCDHB5Q9Y5E4 795 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 ABLIM1O14639 778 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 APODP05090 189 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 CXCL8P10145 99 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 HMGA1P17096 107 aaKnown RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 TNFRSF4P43489 277 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TSPY1Q01534 308 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 ZNF33AQ06730 810 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 KCNB1Q14721 858 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 SPATA1Q5VX52 437 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TMPRSS7Q7RTY8 843 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TMEM150AQ86TG1 271 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TXNDC5Q8NBS9 432 aaKnown RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 HMGB4Q8WW32 186 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 FOXJ1Q92949 421 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TRMT2BQ96GJ1 504 aaKnown RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 PNKPQ96T60 521 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 CDC6Q99741 560 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 TM6SF1Q9BZW5 370 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 TRPC7Q9HCX4 862 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 ABI2Q9NYB9 513 aaPredicted RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 MAGED2Q9UNF1 606 aaPredicted RBP9.36□□□□□ -0.91
SMG1-216ENST00000569122 WNT6Q9Y6F9 365 aa9.36□□□□□ -0.91
SMG1-216ENST00000569122 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 A0A0A0MRY4 1105 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 CYB561D2O14569 222 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 PRPF40AO75400 957 aaKnown RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 KLF8O95600 359 aaPredicted RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 NFICP08651 508 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 OR52Z1P0C646 297 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 HDCP19113 662 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 NMT1P30419 496 aaKnown RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 MCM7P33993 719 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 GRIA2P42262 883 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 ABCG1P45844 678 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 USP4Q13107 963 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMG1-216ENST00000569122 PLEKHG6Q3KR16 790 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 WDR45BQ5MNZ6 344 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 IL17RCQ8NAC3 791 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 ENGASEQ8NFI3 743 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 SH3RF2Q8TEC5 729 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 BICD1Q96G01 975 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 ZBTB45Q96K62 511 aaPredicted RBP9.35□□□□□ -0.91
SMG1-216ENST00000569122 MYRFLQ96LU7 910 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 POLD4Q9HCU8 107 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 ABCB6Q9NP58 842 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 PDRG1Q9NUG6 133 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 EHD2Q9NZN4 543 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 ARHGAP26Q9UNA1 814 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 DERAQ9Y315 318 aa9.35□□□□□ -0.91
SMG1-216ENST00000569122 CACNA1EQ15878 2313 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 BPTFQ12830 3046 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 TCRBV21S2A2A0A5A6 115 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 BTBD18B2RXH4 712 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms