RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RLN3Q8WXF3 142 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 ERLEC1Q96DZ1 483 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 SAAL1Q96ER3 474 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
USB1-214ENST00000568848 TBC1D7Q9P0N9 293 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 L1RE1Q9UN81 338 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 PCDHB5Q9Y5E4 795 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 MYOFQ9NZM1 2061 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 PTPRDP23468 1912 aa16■□□□□ 0.15
USB1-214ENST00000568848 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
USB1-214ENST00000568848 LAD1O00515 517 aa16■□□□□ 0.15
USB1-214ENST00000568848 ATP2C2O75185 946 aa16■□□□□ 0.15
USB1-214ENST00000568848 APBB3O95704 486 aa16■□□□□ 0.15
USB1-214ENST00000568848 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
USB1-214ENST00000568848 EML3Q32P44 896 aa16■□□□□ 0.15
USB1-214ENST00000568848 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
USB1-214ENST00000568848 THEM5Q8N1Q8 247 aa16■□□□□ 0.15
USB1-214ENST00000568848 DEFB124Q8NES8 71 aa16■□□□□ 0.15
USB1-214ENST00000568848 SPPL2BQ8TCT7 592 aa16■□□□□ 0.15
USB1-214ENST00000568848 MRPS31Q92665 395 aaKnown RBP16■□□□□ 0.15
USB1-214ENST00000568848 TMEM121BQ9BXQ6 578 aaPredicted RBP16■□□□□ 0.15
USB1-214ENST00000568848 PARVGQ9HBI0 331 aa16■□□□□ 0.15
USB1-214ENST00000568848 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
USB1-214ENST00000568848 AGO2Q9UKV8 859 aaKnown RBP16■□□□□ 0.15
USB1-214ENST00000568848 CIZ1Q9ULV3 898 aaPredicted RBP16■□□□□ 0.15
USB1-214ENST00000568848 WASF3Q9UPY6 502 aa16■□□□□ 0.15
USB1-214ENST00000568848 FASNP49327 2511 aaKnown RBP15.99■□□□□ 0.15
USB1-214ENST00000568848 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 KPNA7A9QM74 516 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 ATG13O75143 517 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 ITGB3P05106 788 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 ADSSP30520 456 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 IFNAR2P48551 515 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 ZNF131P52739 623 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 IRX4P78413 519 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 TFAMQ00059 246 aaKnown RBP15.99■□□□□ 0.15
USB1-214ENST00000568848 USP4Q13107 963 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 GAB4Q2WGN9 574 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 SYT13Q7L8C5 426 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 SFR1Q86XK3 245 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 SCN4BQ8IWT1 228 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 MDGA1Q8NFP4 955 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 NOC3LQ8WTT2 800 aaKnown RBP15.99■□□□□ 0.15
USB1-214ENST00000568848 CD101Q93033 1021 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 PKMYT1Q99640 499 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 SH2B1Q9NRF2 756 aaPredicted RBP15.99■□□□□ 0.15
USB1-214ENST00000568848 DDX43Q9NXZ2 648 aaKnown RBP15.99■□□□□ 0.15
USB1-214ENST00000568848 HSFX1Q9UBD0 423 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 AGAP1Q9UPQ3 857 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 ADAMTS9Q9P2N4 1935 aa15.99■□□□□ 0.15
USB1-214ENST00000568848 DSPP15924 2871 aaKnown RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 HELZP42694 1942 aaKnown RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 CCDC163A0A0D9SF12 145 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 CDX4O14627 284 aaPredicted RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 FOXD2O60548 495 aaPredicted RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 CKMP06732 381 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 DRD1P21728 446 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 OPRD1P41143 372 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 SLC6A11P48066 632 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 DHPSP49366 369 aaPredicted RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 USP46P62068 366 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 PSMC1P62191 440 aaKnown RBP15.98■□□□□ 0.15
USB1-214ENST00000568848 ELF2Q15723 593 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 DYMQ7RTS9 669 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 CPA6Q8N4T0 437 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 CAMKK1Q8N5S9 505 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 DEFB119Q8N690 84 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 TSTD1Q8NFU3 115 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 SH3RF2Q8TEC5 729 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 OSCP1Q8WVF1 389 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 PIGKQ92643 395 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 RAD54LQ92698 747 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 FAM213AQ9BRX8 229 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 ODF2LQ9ULJ1 636 aa15.98■□□□□ 0.15
USB1-214ENST00000568848 LAMA5O15230 3695 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 DMXL2Q8TDJ6 3036 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 K7EQS6 105 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
USB1-214ENST00000568848 AKAP3O75969 853 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 NOL4O94818 638 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 CD2BP2O95400 341 aaKnown RBP15.97■□□□□ 0.15
USB1-214ENST00000568848 MAPK8P45983 427 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 GTF2BQ00403 316 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 PTPAQ15257 358 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 INTS6LQ5JSJ4 861 aaKnown RBP15.97■□□□□ 0.15
USB1-214ENST00000568848 EMC10Q5UCC4 262 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 PMS2CLQ68D20 193 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 C12orf40Q86WS4 652 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 DCP1BQ8IZD4 617 aaKnown RBP15.97■□□□□ 0.15
USB1-214ENST00000568848 C1orf127Q8N9H9 656 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 POMGNT1Q8WZA1 660 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 SCNM1Q9BWG6 230 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms