RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 HUS1O60921 280 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
NME3-211ENST00000568561 CSH1P0DML2 217 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 CSH2P0DML3 217 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 GAP43P17677 238 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 HOXA6P31267 233 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 PNPLA4P41247 253 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 POU5F1Q01860 360 aaKnown RBP16.68■□□□□ 0.26
NME3-211ENST00000568561 NFE2Q16621 373 aaPredicted RBP16.68■□□□□ 0.26
NME3-211ENST00000568561 RRAGBQ5VZM2 374 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
NME3-211ENST00000568561 NT5DC4Q86YG4 428 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 GAB3Q8WWW8 586 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 HHIPQ96QV1 700 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 RXFP3Q9NSD7 469 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 SLC8A2Q9UPR5 921 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 EXOC7Q9UPT5 735 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 PTPRJQ12913 1337 aa16.68■□□□□ 0.26
NME3-211ENST00000568561 A0A087X0B3 334 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 TRDMT1O14717 391 aaKnown RBP16.67■□□□□ 0.26
NME3-211ENST00000568561 NOL4O94818 638 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
NME3-211ENST00000568561 MYL7Q01449 175 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 MTF1Q14872 753 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 AASDHQ4L235 1098 aaPredicted RBP16.67■□□□□ 0.26
NME3-211ENST00000568561 SV2BQ7L1I2 683 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 SCN4BQ8IWT1 228 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 SYCP3Q8IZU3 236 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 CSGALNACT2Q8N6G5 542 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
NME3-211ENST00000568561 ACBD6Q9BR61 282 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
NME3-211ENST00000568561 ZMYM5Q9UJ78 669 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 WNT6Q9Y6F9 365 aa16.67■□□□□ 0.26
NME3-211ENST00000568561 PRPF6O94906 941 aaKnown RBP16.66■□□□□ 0.26
NME3-211ENST00000568561 CKMP06732 381 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 GJA4P35212 333 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 TXLNAP40222 546 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 GALK1P51570 392 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 RPL10AP62906 217 aaKnown RBP16.66■□□□□ 0.26
NME3-211ENST00000568561 RESTQ13127 1097 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 ZNF77Q15935 545 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 CACNA2D4Q7Z3S7 1137 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 EZH1Q92800 747 aaPredicted RBP16.66■□□□□ 0.26
NME3-211ENST00000568561 P2RY13Q9BPV8 354 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 ITGA11Q9UKX5 1188 aa16.66■□□□□ 0.26
NME3-211ENST00000568561 SRPRBQ9Y5M8 271 aaKnown RBP16.66■□□□□ 0.26
NME3-211ENST00000568561 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 ATP2C2O75185 946 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 EPN2O95208 641 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 TMEM191BP0C7N4 346 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 GARTP22102 1010 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 STAT6P42226 847 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 PSMC1P62191 440 aaKnown RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 USP4Q13107 963 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 ZNF268Q14587 947 aaPredicted RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 PDGFRLQ15198 375 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 SOWAHAQ2M3V2 549 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 SPATA2LQ8IUW3 424 aaPredicted RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 TMEM86AQ8N2M4 240 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 CPA6Q8N4T0 437 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 C12orf50Q8NA57 414 aaPredicted RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 GLIS3Q8NEA6 775 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 OR5B17Q8NGF7 314 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 HPS3Q969F9 1004 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 TRMT2BQ96GJ1 504 aaKnown RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 ECT2Q9H8V3 914 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 OLFML3Q9NRN5 406 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 DUS2Q9NX74 493 aaKnown RBP16.65■□□□□ 0.26
NME3-211ENST00000568561 PCDHB13Q9Y5F0 798 aa16.65■□□□□ 0.26
NME3-211ENST00000568561 NUP205Q92621 2012 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 DCLK1O15075 740 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 ATG13O75143 517 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 RAP1GAPP47736 663 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 IFNAR2P48551 515 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 RBP5P82980 135 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 FAM160A1Q05DH4 1040 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 PSMD2Q13200 908 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 TCEAL6Q6IPX3 200 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 TOP6BLQ8N6T0 577 aa16.64■□□□□ 0.25
NME3-211ENST00000568561 PDILTQ8N807 584 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms