RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NOC3LQ8WTT2 800 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 C2orf15Q8WU43 125 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 FAM3CQ92520 227 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 KCNN1Q92952 543 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 HVCN1Q96D96 273 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 EPSTI1Q96J88 318 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SEC16BQ96JE7 1060 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SENP8Q96LD8 212 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF560Q96MR9 790 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PYM1Q9BRP8 204 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 MKNK1Q9BUB5 465 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 FAM126AQ9BYI3 521 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ATXN3LQ9H3M9 355 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ST6GALNAC4Q9H4F1 302 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 C12orf49Q9H741 205 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 TMEM206Q9H813 350 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 LTB4R2Q9NPC1 389 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 HEBP1Q9NRV9 189 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 BLOC1S4Q9NUP1 217 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PANK4Q9NVE7 773 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 TBC1D7Q9P0N9 293 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CEP72Q9P209 647 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 HSFX1Q9UBD0 423 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZMYM5Q9UJ78 669 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CPSF3Q9UKF6 684 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 FBXO4Q9UKT5 387 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 RAB23Q9ULC3 237 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC27A5Q9Y2P5 690 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 C2CD2Q9Y426 696 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SRPRBQ9Y5M8 271 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CLIC4Q9Y696 253 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 DENND4CQ5VZ89 1909 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 TICRRQ7Z2Z1 1910 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 F5P12259 2224 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 A0A1W2PRU2 124 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 HEPACAM2A8MVW5 462 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 KPNA7A9QM74 516 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PIRO00625 290 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 KIAA0391O15091 583 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 HUS1O60921 280 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CD2BP2O95400 341 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CYP11A1P05108 521 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ADRB2P07550 413 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 KRT19P08727 400 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 OR4Q2P0C623 313 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SYT1P21579 422 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CD72P21854 359 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SDHBP21912 280 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CDC25CP30307 473 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 VIPR2P41587 438 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 EIF1AXP47813 144 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ID4P47928 161 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 AARSP49588 968 aaKnown RBP eCLIP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 GUCY2FP51841 1108 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 MLLT6P55198 1093 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 TFAMQ00059 246 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 AMPD2Q01433 879 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 MYL7Q01449 175 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 TSPY1Q01534 308 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 MYO1EQ12965 1108 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CUL4AQ13619 759 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 LRRC32Q14392 662 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 GRM2Q14416 872 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 STK38Q15208 465 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SURF1Q15526 300 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 TEAD2Q15562 447 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PTPRNQ16849 979 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC39A12Q504Y0 691 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 L1TD1Q5T7N2 865 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CENPPQ6IPU0 288 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CC2D1AQ6P1N0 951 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ERMP1Q7Z2K6 904 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SFR1Q86XK3 245 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 FMNL3Q8IVF7 1028 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC65Q8IXS2 484 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CSGALNACT2Q8N6G5 542 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ATAD1Q8NBU5 361 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SPPL2BQ8TCT7 592 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 RUBCNQ92622 972 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PSMG2Q969U7 264 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 EXOC4Q96A65 974 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 CLDN23Q96B33 292 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 TCEAL4Q96EI5 215 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 MSANTD3Q96H12 275 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF396Q96N95 335 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 SEPT5Q99719 369 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM213AQ9BRX8 229 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 IER2Q9BTL4 223 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PANK2Q9BZ23 570 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PLA2G2FQ9BZM2 168 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 HAPLN2Q9GZV7 340 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 C8orf33Q9H7E9 229 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 LMAN1LQ9HAT1 526 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF334Q9HCZ1 680 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 TRPV5Q9NQA5 729 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ZSCAN32Q9NX65 697 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 NCDNQ9UBB6 729 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms