RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PSME4Q14997 1843 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 LRRD1A4D1F6 860 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 SIGLEC16A6NMB1 481 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 YDJCA8MPS7 323 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF487B1APH4 448 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 I3L4J1 428 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 WNT10BO00744 389 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 TRDMT1O14717 391 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 UBOX5O94941 541 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 CCNE2O96020 404 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ASS1P00966 412 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 IL1BP01584 269 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ERBB2P04626 1255 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 INHBAP08476 426 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 KRT3P12035 628 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ACO1P21399 889 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 CNTFP26441 200 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PCK1P35558 622 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ARL2P36404 184 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 CCNG1P51959 295 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 IRX4P78413 519 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 JAG1P78504 1218 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 CDC42EP1Q00587 391 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 POU5F1BQ06416 359 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PDK2Q15119 407 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 FAM133BQ5BKY9 247 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 EFHC2Q5JST6 749 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 ANKRD20A3Q5VUR7 823 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 TDRD10Q5VZ19 366 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PLA2G4FQ68DD2 849 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 BRICD5Q6PL45 260 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 VSTM1Q6UX27 236 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 BBS12Q6ZW61 710 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PPFIBP2Q8ND30 876 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 MGARPQ8TDB4 240 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 SEPT1Q8WYJ6 367 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 KAT5Q92993 513 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PAIP2Q9BPZ3 127 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 LRMDAQ9H2I8 198 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PAK5Q9P286 719 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PRKAG3Q9UGI9 489 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 PHTF1Q9UMS5 762 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.13
ATXN3-250ENST00000568290 RBBP6Q7Z6E9 1792 aaKnown RBP8.02□□□□□ -1.13
ATXN3-250ENST00000568290 COL11A2P13942 1736 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 hCG_1818297A0A087WSY0 165 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 VGLL3A8MV65 326 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 APOC4-APOC2K7ER74 178 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 C2CD2LO14523 706 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 TRAFD1O14545 582 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 B4GALT4O60513 344 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC22O60826 627 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 LILRB3O75022 631 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MAFO75444 373 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 KRT38O76015 456 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 STK10O94804 968 aaKnown RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ASMTLO95671 621 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 SLC25A27O95847 323 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 APOC2P02655 101 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MT-ND3P03897 115 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 HMGCRP04035 888 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 SETSIPP0DME0 302 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 PSMA2P25787 234 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 PTPN4P29074 926 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 SERPINB9P50453 376 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 STAT5BP51692 787 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF132P52740 706 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 CLNS1AP54105 237 aaKnown RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 DNAJC3Q13217 504 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MTMR2Q13614 643 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZKSCAN8Q15776 578 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 UGCGQ16739 394 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 SHROOM1Q2M3G4 852 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF667Q5HYK9 610 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 CYP4F22Q6NT55 531 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 SLC30A10Q6XR72 485 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 RNF19BQ6ZMZ0 732 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 DNAAF5Q86Y56 855 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZDHHC17Q8IUH5 632 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 CCNJLQ8IV13 435 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZBED8Q8IZ13 594 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MAB21L3Q8N8X9 362 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 KCTD6Q8NC69 237 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 IL31RAQ8NI17 732 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 UHMK1Q8TAS1 419 aaKnown RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 MAML1Q92585 1016 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms