RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TM4SF4P48230 202 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ACOT2P49753 483 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 LIG4P49917 911 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SNRPFP62306 86 aaKnown RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MAP2K1Q02750 393 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 TNFAIP2Q03169 654 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ARID5AQ03989 594 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ASIC2Q16515 512 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MARCH8Q5T0T0 291 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SFMBT2Q5VUG0 894 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 EEF1DP3Q658K8 133 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 RNF43Q68DV7 783 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 EFCAB12Q6NXP0 572 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 C15orf39Q6ZRI6 1047 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 INTS8Q75QN2 995 aaKnown RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF571Q7Z3V5 609 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 REC114Q7Z4M0 266 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 CDR2LQ86X02 465 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 RHPN2Q8IUC4 686 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 GPD1LQ8N335 351 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SLC35F6Q8N357 371 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SLC17A8Q8NDX2 589 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MYRIPQ8NFW9 859 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 LNX1Q8TBB1 728 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 PARD3BQ8TEW8 1205 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 KAT2BQ92831 832 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 GATA6Q92908 595 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 CCDC127Q96BQ5 260 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 BICD1Q96G01 975 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 NLRP4Q96MN2 994 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 KREMEN1Q96MU8 473 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 FAM213AQ9BRX8 229 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 WNT10AQ9GZT5 417 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ERAP1Q9NZ08 941 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 AIPL1Q9NZN9 384 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ANKFY1Q9P2R3 1169 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SUCLA2Q9P2R7 463 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 PCOLCE2Q9UKZ9 415 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 NENFQ9UMX5 172 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 EXOC7Q9UPT5 735 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SCN5AQ14524 2016 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 CNTNAP2Q9UHC6 1331 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 COL1A2P08123 1366 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 A0A087WZ62 844 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 A0A087X0T9 212 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 A0A0B4J269 797 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 GOLGA6L9A6NEM1 432 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 UPK3BL1B0FP48 263 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 UPK3BL2E5RIL1 263 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 F8VZ95 297 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 K7ERI5 159 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TNPO2O14787 897 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CCP110O43303 1012 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CA12O43570 354 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 EXTL3O43909 919 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 GFPT2O94808 682 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 VNN1O95497 513 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CALCAP01258 141 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SERPING1P05155 500 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PRKCBP05771 671 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 FAM228BP0C875 321 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 KRT13P13646 458 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PROZP22891 400 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 KLRC1P26715 233 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CYLC1P35663 651 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 RGS2P41220 211 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PRKCIP41743 596 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SLC26A2P50443 739 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 MXI1P50539 228 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 VAV2P52735 878 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 GNG11P61952 73 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 BEX3Q00994 111 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 MBTD1Q05BQ5 628 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SREBF2Q12772 1141 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PAK2Q13177 524 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 MPP2Q14168 576 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 DRAP1Q14919 205 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ARHGAP44Q17R89 818 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TDRD12Q587J7 1177 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF484Q5JVG2 852 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF569Q5MCW4 686 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 IQSEC1Q6DN90 963 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 MTHFD1LQ6UB35 978 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ZAR1Q86SH2 424 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TLK2Q86UE8 772 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PALB2Q86YC2 1186 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CCDC170Q8IYT3 715 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 MSL3Q8N5Y2 521 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 METTL13Q8N6R0 699 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 RNF149Q8NC42 400 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SMC1BQ8NDV3 1235 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF397Q8NF99 534 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TAS1R2Q8TE23 839 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms