RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SNRPFP62306 86 aaKnown RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 GRSF1Q12849 480 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNF40-209ENST00000566703 DDR2Q16832 855 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 TXNDC8Q6A555 127 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 CC2D1AQ6P1N0 951 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 Q6ZS52 159 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 OSTM1Q86WC4 334 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 ADGRF2Q8IZF7 708 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 PDILTQ8N807 584 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 MTMR12Q9C0I1 747 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 HPS4Q9NQG7 708 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 CDH9Q9ULB4 789 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 USP18Q9UMW8 372 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 TSC2P49815 1807 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 SPTLC2O15270 562 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
RNF40-209ENST00000566703 ATXN1P54253 815 aaKnown RBP16.07■□□□□ 0.16
RNF40-209ENST00000566703 MAPRE1Q15691 268 aaKnown RBP16.07■□□□□ 0.16
RNF40-209ENST00000566703 E2F4Q16254 413 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 VSTM1Q6UX27 236 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 PRR23BQ6ZRT6 265 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 PARD6AQ9NPB6 346 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 CDV3Q9UKY7 258 aaKnown RBP16.07■□□□□ 0.16
RNF40-209ENST00000566703 CCL26Q9Y258 94 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 NUP210Q8TEM1 1887 aaPredicted RBP16.07■□□□□ 0.16
RNF40-209ENST00000566703 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 SPTBN4Q9H254 2564 aa16.07■□□□□ 0.16
RNF40-209ENST00000566703 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
RNF40-209ENST00000566703 YEATS4O95619 227 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 USP17L7P0C7H9 530 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 TCF3P15923 654 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 PFKLP17858 780 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 DRD1P21728 446 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 DMWDQ09019 674 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 SPEM2Q0P670 501 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 CSRP2Q16527 193 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 SDHAF4Q5VUM1 108 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 SCARA3Q6AZY7 606 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 FSTL4Q6MZW2 842 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
RNF40-209ENST00000566703 CBWD2Q8IUF1 395 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 WDR49Q8IV35 697 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 OR5B17Q8NGF7 314 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
RNF40-209ENST00000566703 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 C7orf25Q9BPX7 421 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 HSPBP1Q9NZL4 362 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
RNF40-209ENST00000566703 VPS13AQ96RL7 3174 aa16.06■□□□□ 0.16
RNF40-209ENST00000566703 TRAV19A0A0A6YYK7 116 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 OTOL1A6NHN0 477 aaPredicted RBP16.05■□□□□ 0.16
RNF40-209ENST00000566703 CUTAO60888 179 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 TADA3O75528 432 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 WARSP23381 471 aaKnown RBP16.05■□□□□ 0.16
RNF40-209ENST00000566703 HOXD13P35453 343 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 PDE6CP51160 858 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 MTF1Q14872 753 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 LPAL2Q16609 132 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 TRAPPC11Q7Z392 1133 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 SCN4BQ8IWT1 228 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 CAMKK1Q8N5S9 505 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 KIAA1958Q8N8K9 716 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 OSCP1Q8WVF1 389 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 SYT15Q9BQS2 421 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 GCNT4Q9P109 453 aa16.05■□□□□ 0.16
RNF40-209ENST00000566703 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
RNF40-209ENST00000566703 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 ARSAP15289 507 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 LMO2P25791 158 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 GALK1P51570 392 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 ASIC1P78348 528 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 NR1H3Q13133 447 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 LMBRD2Q68DH5 695 aaPredicted RBP16.04■□□□□ 0.16
RNF40-209ENST00000566703 HEATR6Q6AI08 1181 aaKnown RBP16.04■□□□□ 0.16
RNF40-209ENST00000566703 TRIM68Q6AZZ1 485 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 CEP68Q76N32 757 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.04■□□□□ 0.16
RNF40-209ENST00000566703 CPA6Q8N4T0 437 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 GLIS3Q8NEA6 775 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 RIN3Q8TB24 985 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 NETO1Q8TDF5 533 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms