RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ACKR2O00590 384 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 CTSHP09668 335 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 NOMO3P69849 1222 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 SMC1BQ8NDV3 1235 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 OPTNQ96CV9 577 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 FIS1Q9Y3D6 152 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 VCPP55072 806 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 CCL15Q16663 113 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 DCAF6Q58WW2 860 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 CRLF3Q8IUI8 442 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 TRIM42Q8IWZ5 723 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 HIPK4Q8NE63 616 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 REPS2Q8NFH8 660 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 H3BRB1 525 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH1-210ENST00000566612 HAUS5O94927 633 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 UBOX5O94941 541 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 NDST1P52848 882 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 PLCB4Q15147 1175 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 MAP7D1Q3KQU3 841 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 MDH1BQ5I0G3 518 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 VCPIP1Q96JH7 1222 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 CLMNQ96JQ2 1002 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 FSCN2O14926 492 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 QPCTQ16769 361 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 DCAF12L1Q5VU92 463 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 ATG16L1Q676U5 607 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 JADE1Q6IE81 842 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 ZNF572Q7Z3I7 529 aaPredicted RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 AGR3Q8TD06 166 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 GRAMD1AQ96CP6 724 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 ZNF518BQ9C0D4 1074 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 LRRC19Q9H756 370 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 SETD4Q9NVD3 440 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 ATP9BO43861 1147 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 MCL1Q07820 350 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 SEPT6Q14141 434 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 TAF11Q15544 211 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 MROH9Q5TGP6 573 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 KDELC2Q7Z4H8 507 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 CDKL3Q8IVW4 592 aaPredicted RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
CDH1-210ENST00000566612 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
CDH1-210ENST00000566612 A0A0B4J269 797 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 BANF1O75531 89 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 CYP2B6P20813 491 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 APPL2Q8NEU8 664 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 FAM172AQ8WUF8 416 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 PGBD4Q96DM1 585 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 STXBP5LQ9Y2K9 1186 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 DNALI1O14645 258 aaPredicted RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 NFICP08651 508 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 VDRP11473 427 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 METTL23Q86XA0 190 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 FAM111AQ96PZ2 611 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 OSMRQ99650 979 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 PCMTD2Q9NV79 361 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 NOP53Q9NZM5 478 aaKnown RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 PHTF1Q9UMS5 762 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 USH1CQ9Y6N9 552 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 CHD4Q14839 1912 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 MIPP30301 263 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 SULT1E1P49888 294 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 PTK6Q13882 451 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms