RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 GPR15P49685 360 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 LMNB2Q03252 620 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 SIM2Q14190 667 aaPredicted RBP12.81□□□□□ -0.36
UBR1-206ENST00000566493 GAS6Q14393 721 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 LPAL2Q16609 132 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 DDR2Q16832 855 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 LAIR1Q6GTX8 287 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 TXNDC11Q6PKC3 985 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 MON1AQ86VX9 555 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 ADGRF2Q8IZF7 708 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 LINC00301Q8NCQ3 95 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 FGFBP2Q9BYJ0 223 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 CUEDC2Q9H467 287 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 TDP1Q9NUW8 608 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 GTF3C4Q9UKN8 822 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 DCHS1Q96JQ0 3298 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 PPP6R2O75170 966 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 PAPSS2O95340 614 aaPredicted RBP12.8□□□□□ -0.36
UBR1-206ENST00000566493 FNTBP49356 437 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 ASIC1P78348 528 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBR1-206ENST00000566493 RUNX3Q13761 415 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 SDHAF4Q5VUM1 108 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 TXNDC8Q6A555 127 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
UBR1-206ENST00000566493 C4orf50Q6ZRC1 276 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 Q6ZS52 159 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 DPH6Q7L8W6 267 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 TMEM150AQ86TG1 271 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 LONP2Q86WA8 852 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 FSIP1Q8NA03 581 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 IQUBQ8NA54 791 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
UBR1-206ENST00000566493 DHX58Q96C10 678 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 HPDLQ96IR7 371 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 TRPC7Q9HCX4 862 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
UBR1-206ENST00000566493 DMXL1Q9Y485 3027 aa12.8□□□□□ -0.36
UBR1-206ENST00000566493 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 OBSL1O75147 1896 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CUTAO60888 179 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 ATG13O75143 517 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 NOL4O94818 638 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CCINQ13939 588 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 ZNF268Q14587 947 aaPredicted RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 PDGFRLQ15198 375 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 CEP68Q76N32 757 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 OSTM1Q86WC4 334 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 FUBP3Q96I24 572 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBR1-206ENST00000566493 FAM84AQ96KN4 292 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 FAM83CQ9BQN1 747 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 BACH2Q9BYV9 841 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 EBF3Q9H4W6 596 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 KBTBD4Q9NVX7 518 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 HSPBP1Q9NZL4 362 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 SIX4Q9UIU6 781 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
UBR1-206ENST00000566493 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
UBR1-206ENST00000566493 K7ESF4 209 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 GABRDO14764 452 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 EIF3DO15371 548 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBR1-206ENST00000566493 HRO43593 1189 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 YEATS4O95619 227 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 CKMP06732 381 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 RETP07949 1114 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 USP17L7P0C7H9 530 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 DMWDQ09019 674 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
UBR1-206ENST00000566493 E2F4Q16254 413 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 WDR44Q5JSH3 913 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 FAM26FQ5R3K3 315 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms