RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TTC30AQ86WT1 665 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 TMEM173Q86WV6 379 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 RHOT2Q8IXI1 618 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 ANKRD52Q8NB46 1076 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 SLC35G2Q8TBE7 412 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 BCL7CQ8WUZ0 217 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 ZNF558Q96NG5 402 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 ALS2CR12Q96Q35 445 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 HNRNPABQ99729 332 aaKnown RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 ZBED2Q9BTP6 218 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 MTIF3Q9H2K0 278 aaKnown RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CTTNBP2NLQ9P2B4 639 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 DNAI1Q9UI46 699 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CYTH4Q9UIA0 394 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 MRPL42Q9Y6G3 142 aaKnown RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 SLC4A7Q9Y6M7 1214 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CARNS1A5YM72 827 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 OAZ2O95190 189 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 SETSIPP0DME0 302 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 BCAT1P54687 386 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 TSPY1Q01534 308 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 PTP4A2Q12974 167 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CCDC142Q17RM4 750 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 PKDCCQ504Y2 493 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 C2CD6Q53TS8 623 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CEP57Q86XR8 500 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 SLC35F6Q8N357 371 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 TRIM58Q8NG06 486 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 MYCBPAPQ8TBZ2 947 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 WDR24Q96S15 920 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 MED10Q9BTT4 135 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 AVENQ9NQS1 362 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CAPN6Q9Y6Q1 641 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 MYBPHLA2RUH7 354 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 FGFR3P22607 806 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 HTRA4P83105 476 aaPredicted RBP19.83■□□□□ 0.76
COMMD4-213ENST00000565834 BST2Q10589 180 aaKnown RBP19.83■□□□□ 0.76
COMMD4-213ENST00000565834 PDCLQ13371 301 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 VARS2Q5ST30 1063 aaKnown RBP19.83■□□□□ 0.76
COMMD4-213ENST00000565834 FUKQ8N0W3 1084 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 OR10T2Q8NGX3 314 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 ZNF592Q92610 1267 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 IGSF21Q96ID5 467 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 SYNCQ9H7C4 482 aa19.83■□□□□ 0.76
COMMD4-213ENST00000565834 RRM1P23921 792 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 TCEAL1Q15170 157 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 MAPRE1Q15691 268 aaKnown RBP19.82■□□□□ 0.76
COMMD4-213ENST00000565834 PTPN20Q4JDL3 420 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 COLGALT1Q8NBJ5 622 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 PHOSPHO2Q8TCD6 241 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 IPO4Q8TEX9 1081 aaKnown RBP19.82■□□□□ 0.76
COMMD4-213ENST00000565834 CPXM1Q96SM3 734 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 NUP85Q9BW27 656 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 B3GNT5Q9BYG0 378 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 OSGEPQ9NPF4 335 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 UVRAGQ9P2Y5 699 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 STRIP2Q9ULQ0 834 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 INSL6Q9Y581 213 aa19.82■□□□□ 0.76
COMMD4-213ENST00000565834 CLDN5O00501 218 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 SLC8A3P57103 927 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PLCB3Q01970 1234 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PDE4CQ08493 712 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 ZNF280DQ6N043 979 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 FAM171BQ6P995 826 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 HERC6Q8IVU3 1022 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 SLC39A11Q8N1S5 342 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 KIF18AQ8NI77 898 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 MYLPFQ96A32 169 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PCED1BQ96HM7 432 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 CALR3Q96L12 384 aaKnown RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 B3GALT6Q96L58 329 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 ST7Q9NRC1 585 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 CHORDC1Q9UHD1 332 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 COG5Q9UP83 839 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PCDHGC5Q9Y5F6 944 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 NR2E3Q9Y5X4 410 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PTPRDP23468 1912 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 NLRC5Q86WI3 1866 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 ATP2A2P16615 1042 aaKnown RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 CASQ1P31415 396 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 HADHBP55084 474 aaKnown RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 MRPL58Q14197 206 aaKnown RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 CTXN3Q4LDR2 81 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 CYP4A22Q5TCH4 519 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PAQR9Q6ZVX9 377 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PHLDB2Q86SQ0 1253 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 FAM35AQ86V20 835 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 FIBCD1Q8N539 461 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 TPCN2Q8NHX9 752 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 ZNF564Q8TBZ8 553 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-213ENST00000565834 STK32AQ8WU08 396 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 SLC35F5Q8WV83 523 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 C18orf8Q96DM3 657 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 TMEM169Q96HH4 297 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 TMEM209Q96SK2 561 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 PKMYT1Q99640 499 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 TTPALQ9BTX7 342 aa19.81■□□□□ 0.76
COMMD4-213ENST00000565834 DUSP16Q9BY84 665 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms