RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CLSTN3Q9BQT9 956 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDH1-208ENST00000565810 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 FAM49BQ9NUQ9 324 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 AFF4Q9UHB7 1163 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 DPP7Q9UHL4 492 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TSPAN16Q9UKR8 245 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 MAFFQ9ULX9 164 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 NME7Q9Y5B8 376 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 C2orf71A6NGG8 1288 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 M0QYV0 167 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 O00370 1275 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 FSCN2O14926 492 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 TRIM66O15016 1216 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 AP1G2O75843 785 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MICAL2O94851 1124 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 GLUD1P00367 558 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 C1RP00736 705 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MMEP08473 750 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 CCDC130P13994 396 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ATF2P15336 505 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 BDNFP23560 247 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 DNAJB1P25685 340 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 IRS1P35568 1242 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 CYLC1P35663 651 aaPredicted RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 GRIK1P39086 918 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 TUFMP49411 452 aaKnown RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 BCAT1P54687 386 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 SNX16P57768 344 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ROR1Q01973 937 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 GOLGA7BQ2TAP0 167 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MGAT5BQ3V5L5 792 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 CFAP221Q4G0U5 840 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 WDR59Q6PJI9 974 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 VSTM1Q6UX27 236 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 RSPO2Q6UXX9 243 aaPredicted RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 NOP9Q86U38 636 aaKnown RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 PALB2Q86YC2 1186 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 LRRC8AQ8IWT6 810 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 FUKQ8N0W3 1084 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MSANTD4Q8NCY6 345 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ZNF461Q8TAF7 563 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 GDPD5Q8WTR4 605 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 TFAP2BQ92481 460 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MRPL38Q96DV4 380 aaKnown RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 SMARCD1Q96GM5 515 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 DUSP16Q9BY84 665 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 B3GNT5Q9BYG0 378 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ZNF518BQ9C0D4 1074 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 MIS12Q9H081 205 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 LHX5Q9H2C1 402 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 TLE6Q9H808 572 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 NHEJ1Q9H9Q4 299 aaPredicted RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 CYP4F11Q9HBI6 524 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ABCB6Q9NP58 842 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ACP6Q9NPH0 428 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 LUC7LQ9NQ29 371 aaKnown RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 LMCD1Q9NZU5 365 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 ARHGAP20Q9P2F6 1191 aa8.25□□□□□ -1.09
CDH1-208ENST00000565810 NOCTQ9UK39 431 aaKnown RBP8.25□□□□□ -1.09
CDH1-208ENST00000565810 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDH1-208ENST00000565810 FNDC1Q4ZHG4 1894 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 TNRC18O15417 2968 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 WDR27A2RRH5 827 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 MTMR11A4FU01 709 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SPDYE4A6NLX3 237 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 HIDE1A8MVS5 230 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 RFXAPO00287 272 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CLDN5O00501 218 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 PRRG1O14668 218 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ADAM12O43184 909 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 TGM5O43548 720 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ABLIM3O94929 683 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 LSM8O95777 96 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 CALCAP01258 141 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SETSIPP0DME0 302 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 NPR3P17342 541 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 EIF4A3P38919 411 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 MAGEA11P43364 429 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ALDH1A3P47895 512 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 MAP3K7CLP57077 242 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 RPL10AP62906 217 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 FMO1Q01740 532 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ADCY1Q08828 1119 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 BST2Q10589 180 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 DUSP4Q13115 394 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 PLD1Q13393 1074 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CAMK1Q14012 370 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SPA17Q15506 151 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 LIN9Q5TKA1 542 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 E4F1Q66K89 784 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 HGSNATQ68CP4 663 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 RNF19BQ6ZMZ0 732 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CCDC149Q6ZUS6 474 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 RTL10Q7L3V2 364 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 FAM35AQ86V20 835 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms