RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 HMGA1P17096 107 aaKnown RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 NLRP12P59046 1061 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 PLCB2Q00722 1185 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 ALCAMQ13740 583 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 PON2Q15165 354 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 RSPO4Q2I0M5 234 aaPredicted RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 Q6ZS52 159 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 TMEM150AQ86TG1 271 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 CMTM8Q8IZV2 173 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 GPR161Q8N6U8 529 aaKnown RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 CELF5Q8N6W0 485 aaKnown RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 CXorf38Q8TB03 319 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 ZNF507Q8TCN5 953 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 TMEM206Q9H813 350 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 PDE11AQ9HCR9 933 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 THG1LQ9NWX6 298 aaKnown RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 DDX43Q9NXZ2 648 aaKnown RBP20.31■□□□□ 0.84
SPSB3-207ENST00000565550 EIF3DO15371 548 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPSB3-207ENST00000565550 TGFB1I1O43294 461 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 F11P03951 625 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 KRT19P08727 400 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 ACAT1P24752 427 aaKnown RBP20.3■□□□□ 0.84
SPSB3-207ENST00000565550 BFSP1Q12934 665 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 LPAL2Q16609 132 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 NFE2Q16621 373 aaPredicted RBP20.3■□□□□ 0.84
SPSB3-207ENST00000565550 DGKKQ5KSL6 1271 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 SDHAF4Q5VUM1 108 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 LRRC52Q8N7C0 313 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 MAB21L3Q8N8X9 362 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 STKLD1Q8NE28 680 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 ACBD6Q9BR61 282 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 GKN1Q9NS71 199 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 MAGED2Q9UNF1 606 aaPredicted RBP20.3■□□□□ 0.84
SPSB3-207ENST00000565550 FRYLO94915 3013 aa20.3■□□□□ 0.84
SPSB3-207ENST00000565550 DMXL1Q9Y485 3027 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 MED19A0JLT2 244 aaPredicted RBP20.29■□□□□ 0.84
SPSB3-207ENST00000565550 CLIC2O15247 247 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 RBP5P82980 135 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 DMWDQ09019 674 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 DDR2Q16832 855 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 ITPRIPL2Q3MIP1 535 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 TMEM86AQ8N2M4 240 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 ZMYM5Q9UJ78 669 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 GMEB2Q9UKD1 530 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 GTF3C4Q9UKN8 822 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 ITGA11Q9UKX5 1188 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 RAB23Q9ULC3 237 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 CCL26Q9Y258 94 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 SNX9Q9Y5X1 595 aa20.29■□□□□ 0.84
SPSB3-207ENST00000565550 CHURC1-FNTBB4DL54 471 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 CSH1P0DML2 217 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 CSH2P0DML3 217 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 TGM1P22735 817 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 CYP2F1P24903 491 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 AVPR1AP37288 418 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 FNTBP49356 437 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 MYL7Q01449 175 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 INTS6LQ5JSJ4 861 aaKnown RBP20.28■□□□□ 0.84
SPSB3-207ENST00000565550 LMBRD2Q68DH5 695 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-207ENST00000565550 TXNDC8Q6A555 127 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 PRR23BQ6ZRT6 265 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 STXBP4Q6ZWJ1 553 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 OSTM1Q86WC4 334 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 SMYD4Q8IYR2 804 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-207ENST00000565550 GPD1LQ8N335 351 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 USP13Q92995 863 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-207ENST00000565550 FAM83CQ9BQN1 747 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 MTMR12Q9C0I1 747 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 C2orf42Q9NWW7 574 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 GDAP2Q9NXN4 497 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 SIX4Q9UIU6 781 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 USP18Q9UMW8 372 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 MAPK8IP1Q9UQF2 711 aa20.28■□□□□ 0.84
SPSB3-207ENST00000565550 K7ESF4 209 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 HRO43593 1189 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 HCRTO43612 131 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 MYL1P05976 194 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 TMEM191BP0C7N4 346 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 DDX6P26196 483 aaKnown RBP eCLIP20.27■□□□□ 0.84
SPSB3-207ENST00000565550 RPL10AP62906 217 aaKnown RBP20.27■□□□□ 0.84
SPSB3-207ENST00000565550 CCINQ13939 588 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 CCDC142Q17RM4 750 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
SPSB3-207ENST00000565550 PKMYT1Q99640 499 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 ABCB6Q9NP58 842 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 PARD6AQ9NPB6 346 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 AGPAT3Q9NRZ7 376 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 TDP1Q9NUW8 608 aa20.27■□□□□ 0.84
SPSB3-207ENST00000565550 UBE4BO95155 1302 aa20.27■□□□□ 0.83
SPSB3-207ENST00000565550 CEP250Q9BV73 2442 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 RHOBTB3O94955 611 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 PAPSS2O95340 614 aaPredicted RBP20.26■□□□□ 0.83
SPSB3-207ENST00000565550 HOXC13P31276 330 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 LHX1P48742 406 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 SRSF5Q13243 272 aaKnown RBP20.26■□□□□ 0.83
SPSB3-207ENST00000565550 RUNX3Q13761 415 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 SIM2Q14190 667 aaPredicted RBP20.26■□□□□ 0.83
SPSB3-207ENST00000565550 SOWAHAQ2M3V2 549 aa20.26■□□□□ 0.83
SPSB3-207ENST00000565550 HEATR6Q6AI08 1181 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms