RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 DUSP9Q99956 384 aaKnown RBP10.61□□□□□ -0.71
CDH1-206ENST00000564676 ABCB6Q9NP58 842 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 CRTAC1Q9NQ79 661 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 TMEM221A6NGB7 291 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 ANHXE9PGG2 379 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 M0R296 226 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GPR37L1O60883 481 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MICAL2O94851 1124 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 FGFR1OPO95684 399 aaKnown RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 FGF19O95750 216 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GNA14O95837 355 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 ATF6P18850 670 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 BDNFP23560 247 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GABRR2P28476 465 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GRIK1P39086 918 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 EPHA5P54756 1037 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MCCD1P59942 119 aaPredicted RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 SIGLEC14Q08ET2 396 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 HTR4Q13639 388 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 TEAD2Q15562 447 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 DDR2Q16832 855 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 CFAP221Q4G0U5 840 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SDHAF4Q5VUM1 108 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 FOXR2Q6PJQ5 311 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 PARM1Q6UWI2 310 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 TRIM67Q6ZTA4 783 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 FRMD5Q7Z6J6 570 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 CREBRFQ8IUR6 639 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SLC44A3Q8N4M1 653 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 B3GALNT2Q8NCR0 500 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 FBXL13Q8NEE6 735 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SHKBP1Q8TBC3 707 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MYCBPAPQ8TBZ2 947 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 PCED1BQ96HM7 432 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GCNAQ96QF7 691 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 LRFN3Q9BTN0 628 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SRRTQ9BXP5 876 aaKnown RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 LRRC3Q9BY71 257 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 GPR88Q9GZN0 384 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SDCBP2Q9H190 292 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 ATXN3LQ9H3M9 355 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SMOC2Q9H3U7 446 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 DPEP3Q9H4B8 488 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 SLITRK6Q9H5Y7 841 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 CYP3A43Q9HB55 503 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 APOBEC3GQ9HC16 384 aaKnown RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 ZNF334Q9HCZ1 680 aaPredicted RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MAGED2Q9UNF1 606 aaPredicted RBP10.6□□□□□ -0.71
CDH1-206ENST00000564676 NME7Q9Y5B8 376 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 NUMBLQ9Y6R0 609 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 TECTAO75443 2155 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 BDP1A6H8Y1 2624 aa10.6□□□□□ -0.71
CDH1-206ENST00000564676 MOSPD3O75425 235 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CSH1P0DML2 217 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CSH2P0DML3 217 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 TRIM21P19474 475 aaKnown RBP10.59□□□□□ -0.71
CDH1-206ENST00000564676 ANXA13P27216 316 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CDC25CP30307 473 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 MAGEA11P43364 429 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 ASPAP45381 313 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CBWD6Q4V339 395 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 ARHGAP15Q53QZ3 475 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CBWD3Q5JTY5 395 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 CBWD5Q5RIA9 395 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 VSTM1Q6UX27 236 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 ACOT1Q86TX2 421 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 SEMA4DQ92854 862 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 FGF14Q92915 247 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 TNIP3Q96KP6 325 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 KXD1Q9BQD3 176 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 MED10Q9BTT4 135 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 RPP25Q9BUL9 199 aaKnown RBP10.59□□□□□ -0.71
CDH1-206ENST00000564676 DNAI2Q9GZS0 605 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 NIF3L1Q9GZT8 377 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 ZFP14Q9HCL3 533 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 C11orf16Q9NQ32 467 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 RWDD2AQ9UIY3 292 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 FBXL21Q9UKT6 434 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 DUSP12Q9UNI6 340 aa10.59□□□□□ -0.71
CDH1-206ENST00000564676 ATP8B3O60423 1300 aa10.58□□□□□ -0.71
CDH1-206ENST00000564676 SLC38A8A6NNN8 435 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 PRR33A8MZF0 331 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 CLDN5O00501 218 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 NRG2O14511 850 aaPredicted RBP10.58□□□□□ -0.72
CDH1-206ENST00000564676 TRIM66O15016 1216 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 NARSO43776 548 aaKnown RBP10.58□□□□□ -0.72
CDH1-206ENST00000564676 LRRN2O75325 713 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 CCDC192P0DO97 292 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 CD58P19256 250 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 NDST1P52848 882 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 NLRP12P59046 1061 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 CETN1Q12798 172 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 ORC1Q13415 861 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms