RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 NOC3LQ8WTT2 800 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 MAGEC2Q9UBF1 373 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 NCANO14594 1321 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 TSC2P49815 1807 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 SLC38A8A6NNN8 435 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 F13A1P00488 732 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 WARSP23381 471 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 ME1P48163 572 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 PPP3CCP48454 512 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 AP3M2P53677 418 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 CYP4F8P98187 520 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 PSMD6Q15008 389 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 BMT2Q1RMZ1 405 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 C12orf56Q8IXR9 622 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 KIAA1958Q8N8K9 716 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 OR5B17Q8NGF7 314 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 TMEM174Q8WUU8 243 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 AGPAT3Q9NRZ7 376 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 NCDNQ9UBB6 729 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 RCOR1Q9UKL0 485 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
GTF3C1-204ENST00000564664 ATG13O75143 517 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 TACC1O75410 805 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 STAU1O95793 577 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 TNNI1P19237 187 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 ATICP31939 592 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 GRSF1Q12849 480 aaKnown RBP eCLIP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 PSMD2Q13200 908 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 RUNX3Q13761 415 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 CCINQ13939 588 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 DDR2Q16832 855 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 RESP18Q5W5W9 173 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 TXNDC8Q6A555 127 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 OSTM1Q86WC4 334 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 ZFYVE19Q96K21 471 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 COL4A2P08572 1712 aa13.04□□□□□ -0.32
GTF3C1-204ENST00000564664 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 PRR5-ARHGAP8B1AHC4 643 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 TRDMT1O14717 391 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 TRIM66O15016 1216 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 LRP3O75074 770 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 MYL1P05976 194 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 TCF3P15923 654 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 SOX9P48436 509 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 ARHGAP8P85298 464 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 GAS6Q14393 721 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 TXNDC11Q6PKC3 985 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 LONP2Q86WA8 852 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 CCDC26Q8TAB7 109 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 KBTBD7Q8WVZ9 684 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 GMEB2Q9UKD1 530 aa13.03□□□□□ -0.32
GTF3C1-204ENST00000564664 DENND4CQ5VZ89 1909 aa13.02□□□□□ -0.32
GTF3C1-204ENST00000564664 CCDC163A0A0D9SF12 145 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 LMO2P25791 158 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 ANXA13P27216 316 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms