RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 AGPAT3Q9NRZ7 376 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 EHD2Q9NZN4 543 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 GTF3C4Q9UKN8 822 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 CDH9Q9ULB4 789 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 PTPRDP23468 1912 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 ANAPC1Q9H1A4 1944 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 ZNF292O60281 2723 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 SLC38A8A6NNN8 435 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 TGFB1I1O43294 461 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 PAPSS2O95340 614 aaPredicted RBP16.07■□□□□ 0.16
SPG7-210ENST00000564409 TNNI1P19237 187 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 CYP2F1P24903 491 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 CXCL12P48061 93 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 VSTM1Q6UX27 236 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 CEP57L1Q8IYX8 460 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 OR5B17Q8NGF7 314 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 SCFD1Q8WVM8 642 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 HINFPQ9BQA5 517 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
SPG7-210ENST00000564409 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 MYL1P05976 194 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 PFKLP17858 780 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 ACAT1P24752 427 aaKnown RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 ID4P47928 161 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 PDE6CP51160 858 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 AP3M2P53677 418 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 CYP24A1Q07973 514 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 PSMD2Q13200 908 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 DDR2Q16832 855 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 OSTM1Q86WC4 334 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 TMEM174Q8WUU8 243 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 EXOC4Q96A65 974 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 CGRRF1Q99675 332 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 SYT15Q9BQS2 421 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 GTSE1Q9NYZ3 720 aa16.06■□□□□ 0.16
SPG7-210ENST00000564409 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 MAGED2Q9UNF1 606 aaPredicted RBP16.06■□□□□ 0.16
SPG7-210ENST00000564409 TACC1O75410 805 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 STAU1O95793 577 aaKnown RBP16.05■□□□□ 0.16
SPG7-210ENST00000564409 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
SPG7-210ENST00000564409 TDGF1P13385 188 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 HOXA6P31267 233 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 ATICP31939 592 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 CYP2J2P51589 502 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 PDGFRLQ15198 375 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 LMBRD2Q68DH5 695 aaPredicted RBP16.05■□□□□ 0.16
SPG7-210ENST00000564409 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 RDH13Q8NBN7 331 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 USP13Q92995 863 aaPredicted RBP16.05■□□□□ 0.16
SPG7-210ENST00000564409 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 NCDNQ9UBB6 729 aa16.05■□□□□ 0.16
SPG7-210ENST00000564409 TRAV19A0A0A6YYK7 116 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 TRIM66O15016 1216 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 USP17L7P0C7H9 530 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 SDHBP21912 280 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 CNR2P34972 360 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 PPP3CCP48454 512 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 GPR15P49685 360 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 CDR1P51861 262 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 RUNX3Q13761 415 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 CCINQ13939 588 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 TXNDC8Q6A555 127 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 NELFCDQ8IXH7 590 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 KIAA1958Q8N8K9 716 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 MYCBPAPQ8TBZ2 947 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 ZFYVE19Q96K21 471 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 SNX25Q9H3E2 840 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 SLC39A2Q9NP94 309 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 RAB23Q9ULC3 237 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 SMG5Q9UPR3 1016 aaKnown RBP16.04■□□□□ 0.16
SPG7-210ENST00000564409 GPR179Q6PRD1 2367 aa16.04■□□□□ 0.16
SPG7-210ENST00000564409 CLIC2O15247 247 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 TCF3P15923 654 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 CMA1P23946 247 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 LMO2P25791 158 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 ANXA13P27216 316 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 GNL1P36915 607 aaPredicted RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 AFMP43652 599 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 SOX9P48436 509 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 TNNC1P63316 161 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms