RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.76■□□□□ 0.43
RNF40-206ENST00000564260 CNTN6Q9UQ52 1028 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 UNC80Q8N2C7 3258 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 CLUHO75153 1309 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 SOBPA7XYQ1 873 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 LGALS16A8MUM7 142 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 CSH1P0DML2 217 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 CSH2P0DML3 217 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 PON1P27169 355 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 RAP1GAPP47736 663 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 PSMC1P62191 440 aaKnown RBP17.75■□□□□ 0.43
RNF40-206ENST00000564260 STILQ15468 1287 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 CLUL1Q15846 466 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 MDH1BQ5I0G3 518 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 UBR7Q8N806 425 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 SMARCD1Q96GM5 515 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 SEPT5Q99719 369 aaPredicted RBP17.75■□□□□ 0.43
RNF40-206ENST00000564260 HNRNPABQ99729 332 aaKnown RBP17.75■□□□□ 0.43
RNF40-206ENST00000564260 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 HSD3B7Q9H2F3 369 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 CRISPLD1Q9H336 500 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 PNPLA8Q9NP80 782 aa17.75■□□□□ 0.43
RNF40-206ENST00000564260 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
RNF40-206ENST00000564260 COPB1P53618 953 aaKnown RBP17.74■□□□□ 0.43
RNF40-206ENST00000564260 ZNF445P59923 1031 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 CYP27A1Q02318 531 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 MEA1Q16626 185 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 PABPC1LQ4VXU2 614 aaKnown RBP17.74■□□□□ 0.43
RNF40-206ENST00000564260 CYP4A22Q5TCH4 519 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 ARHGAP17Q68EM7 881 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 PHLDB3Q6NSJ2 640 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 WHAMMQ8TF30 809 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 ACSF2Q96CM8 615 aaPredicted RBP17.74■□□□□ 0.43
RNF40-206ENST00000564260 TRMT2BQ96GJ1 504 aaKnown RBP17.74■□□□□ 0.43
RNF40-206ENST00000564260 DPEP3Q9H4B8 488 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 ASAH2Q9NR71 780 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 COMMD8Q9NX08 183 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 CEP72Q9P209 647 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 NME7Q9Y5B8 376 aa17.74■□□□□ 0.43
RNF40-206ENST00000564260 GOLGA6L19H0YKK7 550 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 PES1O00541 588 aaKnown RBP17.73■□□□□ 0.43
RNF40-206ENST00000564260 CCL16O15467 120 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 ATP2C2O75185 946 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 LRRN2O75325 713 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 CD58P19256 250 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 ACO1P21399 889 aaKnown RBP17.73■□□□□ 0.43
RNF40-206ENST00000564260 ANXA13P27216 316 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 KCNQ1P51787 676 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 HSP90AA4PQ58FG1 418 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 ACOT1Q86TX2 421 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 MYRFLQ96LU7 910 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 ARID3AQ99856 593 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 GPR88Q9GZN0 384 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 POMKQ9H5K3 350 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 CBX8Q9HC52 389 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 CSNK1G1Q9HCP0 422 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 DMAP1Q9NPF5 467 aaPredicted RBP17.73■□□□□ 0.43
RNF40-206ENST00000564260 TAB2Q9NYJ8 693 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 GDE1Q9NZC3 331 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 SLC27A5Q9Y2P5 690 aa17.73■□□□□ 0.43
RNF40-206ENST00000564260 C19orf67A6NJJ6 358 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 NOL4O94818 638 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 RHOP08100 348 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 VDRP11473 427 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 IL9P15248 144 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 ATF6P18850 670 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 CYP2F1P24903 491 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 PPP3CCP48454 512 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 RAD23BP54727 409 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 SLC8A3P57103 927 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 ZP2Q05996 745 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 TAF12Q16514 161 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 PDZD4Q76G19 769 aaPredicted RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 APTXQ7Z2E3 356 aaKnown RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 GRASPQ7Z6J2 395 aaPredicted RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 DNAJB7Q7Z6W7 309 aaPredicted RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 FAM35AQ86V20 835 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 FMNL3Q8IVF7 1028 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 ZDHHC14Q8IZN3 488 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 FUKQ8N0W3 1084 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 NXPE3Q969Y0 559 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 CYFIP2Q96F07 1278 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 ERGIC2Q96RQ1 377 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 CRACR2AQ9BSW2 395 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 B3GNT5Q9BYG0 378 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 UBXN6Q9BZV1 441 aa17.72■□□□□ 0.43
RNF40-206ENST00000564260 UBE2TQ9NPD8 197 aaPredicted RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
RNF40-206ENST00000564260 LOC730098B7Z3J9 87 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 HCRTO43612 131 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 FAM200BP0CF97 657 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 SLC9A1P19634 815 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 BDNFP23560 247 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 FSHRP23945 695 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms