RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 FCER1AP12319 257 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CR2P20023 1033 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 MGAT1P26572 445 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 LRPAP1P30533 357 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 RPS19P39019 145 aaKnown RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 RXRGP48443 463 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 AFF3P51826 1226 aaKnown RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 PPP2CBP62714 309 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 PPP2CAP67775 309 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 MPP1Q00013 466 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 NSUN2Q08J23 767 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD9-209ENST00000564255 ATP1A4Q13733 1029 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 PLA1AQ53H76 456 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 WDR78Q5VTH9 848 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 C1orf122Q6ZSJ8 110 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 TMPRSS9Q7Z410 1059 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 LRRTM4Q86VH4 590 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SYT12Q8IV01 421 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SLC44A2Q8IWA5 706 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 RNF169Q8NCN4 708 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 RAPGEF4Q8WZA2 1011 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 LRIG1Q96JA1 1093 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 RBM15Q96T37 977 aaKnown RBP eCLIP3.01□□□□□ -1.934e-6■■□□□ 12.2
CHD9-209ENST00000564255 MPHOSPH9Q99550 1183 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SMOQ99835 787 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 TWSG1Q9GZX9 223 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 MEGF9Q9H1U4 602 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 C12orf65Q9H3J6 166 aaKnown RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 UBN1Q9NPG3 1134 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 ZSCAN32Q9NX65 697 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CTTNBP2NLQ9P2B4 639 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 HSFX1Q9UBD0 423 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 LPAR3Q9UBY5 353 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 FEM1BQ9UK73 627 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SHOC2Q9UQ13 582 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 HDAC5Q9UQL6 1122 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 TCAF2A6NFQ2 919 aa3□□□□□ -1.93
CHD9-209ENST00000564255 E7ENX8 843 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ANXA6P08133 673 aa3□□□□□ -1.93
CHD9-209ENST00000564255 INHBBP09529 407 aa3□□□□□ -1.93
CHD9-209ENST00000564255 C1QTNF9P0C862 333 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ATICP31939 592 aa3□□□□□ -1.93
CHD9-209ENST00000564255 CASP2P42575 452 aa3□□□□□ -1.93
CHD9-209ENST00000564255 CDK7P50613 346 aa3□□□□□ -1.93
CHD9-209ENST00000564255 DGKEP52429 567 aa3□□□□□ -1.93
CHD9-209ENST00000564255 EIF5P55010 431 aaKnown RBP3□□□□□ -1.93
CHD9-209ENST00000564255 LOXL3P58215 753 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TAP2Q03519 686 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PIGFQ07326 219 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TAF12Q16514 161 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TRIM60Q495X7 471 aa3□□□□□ -1.93
CHD9-209ENST00000564255 DCAF17Q5H9S7 520 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 FAXCQ5TGI0 409 aa3□□□□□ -1.93
CHD9-209ENST00000564255 NAIF1Q69YI7 327 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 MED25Q71SY5 747 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TMEM151BQ8IW70 566 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ASB12Q8WXK4 309 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ZDHHC12Q96GR4 267 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PNKPQ96T60 521 aa3□□□□□ -1.93
CHD9-209ENST00000564255 DPYSL5Q9BPU6 564 aa3□□□□□ -1.93
CHD9-209ENST00000564255 RTKNQ9BST9 563 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PABPC3Q9H361 631 aaKnown RBP3□□□□□ -1.93
CHD9-209ENST00000564255 SAYSD1Q9NPB0 183 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PRDM8Q9NQV8 689 aa3□□□□□ -1.93
CHD9-209ENST00000564255 HELLSQ9NRZ9 838 aa3□□□□□ -1.93
CHD9-209ENST00000564255 RASSF1Q9NS23 344 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TBC1D30Q9Y2I9 924 aa3□□□□□ -1.93
CHD9-209ENST00000564255 HS3ST4Q9Y661 456 aa3□□□□□ -1.93
CHD9-209ENST00000564255 CDY1Q9Y6F8 540 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TISP43B9A030 160 aa3□□□□□ -1.93
CHD9-209ENST00000564255 POLRMTO00411 1230 aaKnown RBP3□□□□□ -1.93
CHD9-209ENST00000564255 RRP9O43818 475 aaKnown RBP3□□□□□ -1.93
CHD9-209ENST00000564255 CENPBP07199 599 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 ITGA2BP08514 1039 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TAL1P17542 331 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 KCNA3P22001 575 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PTDSS1P48651 473 aaKnown RBP3□□□□□ -1.93
CHD9-209ENST00000564255 CHN2P52757 468 aa3□□□□□ -1.93
CHD9-209ENST00000564255 AP2B1P63010 937 aa3□□□□□ -1.93
CHD9-209ENST00000564255 FHL3Q13643 280 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ADCK5Q3MIX3 580 aa3□□□□□ -1.93
CHD9-209ENST00000564255 FAM102AQ5T9C2 384 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 TAPT1Q6NXT6 567 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TAF2Q6P1X5 1199 aa3□□□□□ -1.93
CHD9-209ENST00000564255 HTR3DQ70Z44 454 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ZNF280BQ86YH2 543 aa3□□□□□ -1.93
CHD9-209ENST00000564255 RHOT2Q8IXI1 618 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PSD4Q8NDX1 1056 aa3□□□□□ -1.93
CHD9-209ENST00000564255 SMCR8Q8TEV9 937 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 THAP4Q8WY91 577 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ST8SIA2Q92186 375 aa3□□□□□ -1.93
CHD9-209ENST00000564255 ZNF668Q96K58 619 aaPredicted RBP3□□□□□ -1.93
CHD9-209ENST00000564255 MED15Q96RN5 788 aa3□□□□□ -1.93
CHD9-209ENST00000564255 TRIB1Q96RU8 372 aa3□□□□□ -1.93
CHD9-209ENST00000564255 PLA2G12BQ9BX93 195 aa3□□□□□ -1.93
CHD9-209ENST00000564255 EPC1Q9H2F5 836 aa3□□□□□ -1.93
CHD9-209ENST00000564255 RIC8AQ9NPQ8 531 aa3□□□□□ -1.93
CHD9-209ENST00000564255 VPS51Q9UID3 782 aa3□□□□□ -1.93
CHD9-209ENST00000564255 SLC13A4Q9UKG4 626 aa3□□□□□ -1.93
CHD9-209ENST00000564255 SLC30A1Q9Y6M5 507 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms