RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 GRID1Q9ULK0 1009 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 GNGT2O14610 69 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 TM9SF1O15321 606 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 ATP9BO43861 1147 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 EDF1O60869 148 aaKnown RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 SLITRK3O94933 977 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 ELK3P41970 407 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 MAB21L3Q8N8X9 362 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 GDPD5Q8WTR4 605 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 LRMDAQ9H2I8 198 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 NDUFA13Q9P0J0 144 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 FKBP6O75344 327 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 SERPINB5P36952 375 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 SREBF1P36956 1147 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 ACTR2P61160 394 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 RPL10AP62906 217 aaKnown RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 MTMR2Q13614 643 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 LAYNQ6UX15 382 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 CATSPER1Q8NEC5 780 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 NRBF2Q96F24 287 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 MASTLQ96GX5 879 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 EBF2Q9HAK2 575 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 PACSIN3Q9UKS6 424 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 TMEM150BA6NC51 233 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 E9PBE3 544 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 H0YGN5 161 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 KLHL41O60662 606 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 MCL1Q07820 350 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 SPOCD1Q6ZMY3 1216 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.31
COMMD4-209ENST00000564068 ARL8BQ9NVJ2 186 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 NFS1Q9Y697 457 aa13.15□□□□□ -0.31
COMMD4-209ENST00000564068 TPST1O60507 370 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 TRABD2AQ86V40 505 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 ZCCHC9Q8N567 271 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SRPK1Q96SB4 655 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 NDNQ99608 321 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 ARHGEF3Q9NR81 526 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SOX13Q9UN79 622 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 NCANO14594 1321 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 ZC3H4Q9UPT8 1303 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 A8MXQ7 604 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 AKAP10O43572 662 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SMNDC1O75940 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 CCND2P30279 289 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 PSEN1P49768 467 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 RGS7P49802 495 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 EFTUD2Q15029 972 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■■■ 52.3
COMMD4-209ENST00000564068 DUOXA2Q1HG44 320 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 CWF19L1Q69YN2 538 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 EMC1Q8N766 993 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SLC5A4Q9NY91 659 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 IL1RAPL1Q9NZN1 696 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 PROCP04070 461 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 UCMAQ8WVF2 138 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 ASCC2Q9H1I8 757 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-209ENST00000564068 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms