RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 FMO1Q01740 532 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
SPG7-209ENST00000564047 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
SPG7-209ENST00000564047 SLC18A3Q16572 532 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 INTS6LQ5JSJ4 861 aaKnown RBP13.7□□□□□ -0.22
SPG7-209ENST00000564047 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 C12orf29Q8N999 325 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 KLHL23Q8NBE8 558 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 LNX1Q8TBB1 728 aaPredicted RBP13.7□□□□□ -0.22
SPG7-209ENST00000564047 PIK3R5Q8WYR1 880 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
SPG7-209ENST00000564047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPG7-209ENST00000564047 PDCL3Q9H2J4 239 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 ADAMTS1Q9UHI8 967 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 LZTS1Q9Y250 596 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 WDFY4Q6ZS81 3184 aa13.7□□□□□ -0.22
SPG7-209ENST00000564047 A0A087X0T9 212 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 ATP2C2O75185 946 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 LCA5LO95447 670 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 FAM228BP0C875 321 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 GLUD2P49448 558 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 DSG1Q02413 1049 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 TFF2Q03403 129 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 MTF1Q14872 753 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 KIAA1841Q6NSI8 718 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 FAM171BQ6P995 826 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 LCLAT1Q6UWP7 414 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 CYFIP2Q96F07 1278 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 B3GALT6Q96L58 329 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 PCDHB18PQ96TA0 734 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 PKMYT1Q99640 499 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 HNRNPABQ99729 332 aaKnown RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 ZCWPW1Q9H0M4 648 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 CRTAC1Q9NQ79 661 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 MTRRQ9UBK8 725 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 NENFQ9UMX5 172 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG7-209ENST00000564047 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
SPG7-209ENST00000564047 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
SPG7-209ENST00000564047 MYBPHLA2RUH7 354 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 MICAL2O94851 1124 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 ARHGEF15O94989 841 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 IPO7O95373 1038 aaKnown RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 LSM8O95777 96 aaKnown RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 CYP1A1P04798 512 aaPredicted RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 URODP06132 367 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 GZMAP12544 262 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPG7-209ENST00000564047 KCNQ1P51787 676 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 ERVK-21P61565 698 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 TAP1Q03518 808 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 UBE3AQ05086 875 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 SPA17Q15506 151 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 MDH1BQ5I0G3 518 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 PPP1R26Q5T8A7 1209 aaPredicted RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 PPP1R2P3Q6NXS1 205 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 VPS52Q8N1B4 723 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 C17orf80Q9BSJ5 609 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 ZNF518BQ9C0D4 1074 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 ZBP1Q9H171 429 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 SEPT11Q9NVA2 429 aaKnown RBP13.68□□□□□ -0.22
SPG7-209ENST00000564047 HESX1Q9UBX0 185 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 GTF3C4Q9UKN8 822 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 CEP83Q9Y592 693 aa13.68□□□□□ -0.22
SPG7-209ENST00000564047 TSC2P49815 1807 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 ZNF263O14978 683 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 UQCRHP07919 91 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 CFHP08603 1231 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 CTSAP10619 480 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 UNGP13051 313 aaPredicted RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 CCDC130P13994 396 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 KRT83P78385 493 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 CREMQ03060 361 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 SMARCB1Q12824 385 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms