RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SYT15Q9BQS2 421 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 TRIM9Q9C026 710 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 SMG9Q9H0W8 520 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 SNX25Q9H3E2 840 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 RBM12Q9NTZ6 932 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 HSPBP1Q9NZL4 362 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 TFIP11Q9UBB9 837 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 MAGEC2Q9UBF1 373 aaPredicted RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 CDH9Q9ULB4 789 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 SPTBN4Q9H254 2564 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 TSC2P49815 1807 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 LRP3O75074 770 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 PHACTR2O75167 634 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 PAPSS2O95340 614 aaPredicted RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 F11P03951 625 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 RETP07949 1114 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 DLATP10515 647 aaKnown RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 HMGA1P17096 107 aaKnown RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 GRIK1P39086 918 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 ME1P48163 572 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 FNTBP49356 437 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 TNNC1P63316 161 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 FAM160A1Q05DH4 1040 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 TNK2Q07912 1038 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 ZNF268Q14587 947 aaPredicted RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 LPAL2Q16609 132 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 CFAP221Q4G0U5 840 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 SDHAF4Q5VUM1 108 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 LMBRD2Q68DH5 695 aaPredicted RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 TXNDC8Q6A555 127 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 CEP57L1Q8IYX8 460 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 USP13Q92995 863 aaPredicted RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 TRMT2BQ96GJ1 504 aaKnown RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 CEP295NLQ96MC4 621 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 LRRC3BQ96PB8 259 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 BACH2Q9BYV9 841 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 EBF3Q9H4W6 596 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 TMLHEQ9NVH6 421 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 KBTBD4Q9NVX7 518 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
CLN6-203ENST00000563917 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 SLC8A2Q9UPR5 921 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 NCANO14594 1321 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 UBE4BO95155 1302 aa10.23□□□□□ -0.77
CLN6-203ENST00000563917 A0A087X0B3 334 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 TRIM66O15016 1216 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 POLR2DO15514 142 aaKnown RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 NOL4O94818 638 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 TRIM21P19474 475 aaKnown RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 DRD1P21728 446 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 MAGEA11P43364 429 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 CYP2J2P51589 502 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 CCINQ13939 588 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 FBXO43Q4G163 708 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 FOXD4L5Q5VV16 416 aaPredicted RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 TXNDC11Q6PKC3 985 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 UNC13DQ70J99 1090 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 TRAPPC11Q7Z392 1133 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 CBWD2Q8IUF1 395 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 ZSWIM2Q8NEG5 633 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 GOLGA5Q8TBA6 731 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 ATP2A3Q93084 1043 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 CCDC127Q96BQ5 260 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 MYRFLQ96LU7 910 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 C7orf25Q9BPX7 421 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 FAM83CQ9BQN1 747 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 FGFBP2Q9BYJ0 223 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
CLN6-203ENST00000563917 DLL3Q9NYJ7 618 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 TRPM5Q9NZQ8 1165 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 SIX4Q9UIU6 781 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 CFAP54Q96N23 3096 aa10.22□□□□□ -0.77
CLN6-203ENST00000563917 ZNF638Q14966 1978 aaKnown RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 GABRDO14764 452 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 EXOC3O60645 756 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 NFATC1O95644 943 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 FAM163BP0C2L3 166 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 CCDC192P0DO97 292 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 TDGF1P13385 188 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 PFKLP17858 780 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 HDCP19113 662 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 HOXA6P31267 233 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 GNL1P36915 607 aaPredicted RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 PPP3CCP48454 512 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 GPR15P49685 360 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 WNT7BP56706 349 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 PSMC1P62191 440 aaKnown RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 SPEM2Q0P670 501 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms