RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.66
RNF40-204ENST00000563683 BAG2O95816 211 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 NAMPTP43490 491 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 AP3M2P53677 418 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 PIGHQ14442 188 aaPredicted RBP10.96□□□□□ -0.66
RNF40-204ENST00000563683 ATP13A4Q4VNC1 1196 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 NIPA1Q7RTP0 329 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 SDCCAG8Q86SQ7 713 aaPredicted RBP10.96□□□□□ -0.66
RNF40-204ENST00000563683 PRUNE1Q86TP1 453 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 ATP11CQ8NB49 1132 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 ERP27Q96DN0 273 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 DHX35Q9H5Z1 703 aaKnown RBP10.96□□□□□ -0.66
RNF40-204ENST00000563683 SIX2Q9NPC8 291 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 CISHQ9NSE2 258 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 FAM49BQ9NUQ9 324 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 NUB1Q9Y5A7 615 aa10.96□□□□□ -0.66
RNF40-204ENST00000563683 TOM1L1O75674 476 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 CCNE2O96020 404 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 APRTP07741 180 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ADORA2BP29275 332 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 CUL3Q13618 768 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 LAMB3Q13751 1172 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 LY6KQ17RY6 165 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 LONP2Q86WA8 852 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 SPATA18Q8TC71 538 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 SHC3Q92529 594 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 PWWP2AQ96N64 755 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 MYLK2Q9H1R3 596 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 RAB6BQ9NRW1 208 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 WHRNQ9P202 907 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 CHMP2BQ9UQN3 213 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 STARD13Q9Y3M8 1113 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ASB3Q9Y575 518 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ACTL7BQ9Y614 415 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 SLIT2O94813 1529 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 COPEO14579 308 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 NVLO15381 856 aaKnown RBP10.95□□□□□ -0.66
RNF40-204ENST00000563683 ITGB3P05106 788 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 KITP10721 976 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 DSG3P32926 999 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 PTDSS1P48651 473 aaKnown RBP10.95□□□□□ -0.66
RNF40-204ENST00000563683 ERFP50548 548 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 IER5Q5VY09 327 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 PCGF5Q86SE9 256 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ABRAQ8N0Z2 381 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ARHGAP24Q8N264 748 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 FAM13CQ8NE31 585 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 CDKL2Q92772 493 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 IRAK4Q9NWZ3 460 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 DLGAP2Q9P1A6 1054 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 WDR35Q9P2L0 1181 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 DOT1LQ8TEK3 1739 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 TCRBV7S2A1N4TA0A589 114 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 FAM47DPA6NHR8 397 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 M0QZ92 97 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 OGTO15294 1046 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 VHLP40337 213 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 RFC5P40937 340 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 RAP1GAPP47736 663 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
RNF40-204ENST00000563683 TMPRSS15P98073 1019 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 FKBP1CQ5VVH2 108 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 FAM71DQ8N9W8 422 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 DRAXINQ8NBI3 349 aaPredicted RBP10.95□□□□□ -0.66
RNF40-204ENST00000563683 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 METTL5Q9NRN9 209 aaKnown RBP10.95□□□□□ -0.66
RNF40-204ENST00000563683 RNF181Q9P0P0 153 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
RNF40-204ENST00000563683 ATAD5Q96QE3 1844 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 A8MXQ7 604 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 KRT37O76014 449 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 TTC4O95801 387 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 RPS12P25398 132 aaKnown RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 ROR1Q01973 937 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 GCNT1Q02742 428 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 NR1H3Q13133 447 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 DAW1Q8N136 415 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 FGD4Q96M96 766 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 KCNN4O15554 427 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 PEX10O60683 326 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
RNF40-204ENST00000563683 SP100P23497 879 aaPredicted RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 CDH8P55286 799 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CENPCQ03188 943 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CYP1B1Q16678 543 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 FAXCQ5TGI0 409 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CCDC33Q8N5R6 958 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 PPP4R1Q8TF05 950 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 TRIM55Q9BYV6 548 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 C10orf88Q9H8K7 445 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SMYD2Q9NRG4 433 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 LAMB1P07942 1786 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 TCEA3O75764 348 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms