RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 P4HA1P13674 534 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 GJA1P17302 382 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 BDNFP23560 247 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 MAGEA11P43364 429 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ALDH1A3P47895 512 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 EPHB3P54753 998 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 PLD1Q13393 1074 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ORC1Q13415 861 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 MTMR3Q13615 1198 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 DDR2Q16832 855 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 MDH1BQ5I0G3 518 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 C11orf57Q6ZUT1 292 aaPredicted RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 GAREM2Q75VX8 874 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 TMEM150AQ86TG1 271 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ACOT1Q86TX2 421 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 UNC93AQ86WB7 457 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 SPATA2LQ8IUW3 424 aaPredicted RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 UBR7Q8N806 425 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 B3GALNT2Q8NCR0 500 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ST13P5Q8NFI4 369 aaPredicted RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 SHKBP1Q8TBC3 707 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ING5Q8WYH8 240 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 FUBP3Q96I24 572 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBR1-204ENST00000563239 FAXDC2Q96IV6 333 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ZSWIM3Q96MP5 696 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 ELOVL4Q9GZR5 314 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 SMOC2Q9H3U7 446 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBR1-204ENST00000563239 MAGEC2Q9UBF1 373 aaPredicted RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 CDH7Q9ULB5 785 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 MRPS23Q9Y3D9 190 aaKnown RBP9.11□□□□□ -0.95
UBR1-204ENST00000563239 ASB3Q9Y575 518 aa9.11□□□□□ -0.95
UBR1-204ENST00000563239 PTPRDP23468 1912 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 P4HA2O15460 535 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 NOL4O94818 638 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 AFPP02771 609 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 CCDC192P0DO97 292 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 MYL4P12829 197 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 GBP2P32456 591 aaPredicted RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 CYP27A1Q02318 531 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 CUL2Q13617 745 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 HTR4Q13639 388 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 MAPRE1Q15691 268 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 PTPN21Q16825 1174 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 DPY19L2P1Q6NXN4 242 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 C4orf50Q6ZRC1 276 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 FUKQ8N0W3 1084 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 ELMOD1Q8N336 334 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 C12orf29Q8N999 325 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 ENOX1Q8TC92 643 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 RSAD2Q8WXG1 361 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 KAT5Q92993 513 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 MCRS1Q96EZ8 462 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 RPP25Q9BUL9 199 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 IMPG2Q9BZV3 1241 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 KCNK12Q9HB15 430 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 C11orf16Q9NQ32 467 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 ASAH2Q9NR71 780 aa9.1□□□□□ -0.95
UBR1-204ENST00000563239 SAMSN1Q9NSI8 373 aaKnown RBP9.1□□□□□ -0.95
UBR1-204ENST00000563239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBR1-204ENST00000563239 A0A1W2PRU2 124 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 SLC38A8A6NNN8 435 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 F8VP50 259 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 ZNF197O14709 1029 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 DCXO43602 365 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 TADA3O75528 432 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 F11P03951 625 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CCDC130P13994 396 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CD58P19256 250 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 ACO1P21399 889 aaKnown RBP9.09□□□□□ -0.95
UBR1-204ENST00000563239 FCARP24071 287 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 RAD23BP54727 409 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 USP46P62068 366 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 RPL10AP62906 217 aaKnown RBP9.09□□□□□ -0.95
UBR1-204ENST00000563239 ZXDAP98168 799 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 TYRO3Q06418 890 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 LRMPQ12912 555 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 NCAPHQ15003 741 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 TEAD2Q15562 447 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 KLHL40Q2TBA0 621 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 HSP90AA4PQ58FG1 418 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 MIIPQ5JXC2 388 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 STXBP5Q5T5C0 1151 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CYP4A22Q5TCH4 519 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CDKAL1Q5VV42 579 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CAVIN1Q6NZI2 390 aaKnown RBP9.09□□□□□ -0.95
UBR1-204ENST00000563239 PARM1Q6UWI2 310 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 VSTM1Q6UX27 236 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 PDZD4Q76G19 769 aaPredicted RBP9.09□□□□□ -0.95
UBR1-204ENST00000563239 ITIH5Q86UX2 942 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms