RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 C2orf15Q8WU43 125 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 SEMA4DQ92854 862 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 ELMO3Q96BJ8 720 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 FAXDC2Q96IV6 333 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 PGLYRP2Q96PD5 576 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 MMS19Q96T76 1030 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 MRPL45Q9BRJ2 306 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 COL25A1Q9BXS0 654 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 CYP4F11Q9HBI6 524 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 APOBEC3GQ9HC16 384 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 WDR6Q9NNW5 1121 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 TMLHEQ9NVH6 421 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
CNOT1-204ENST00000563130 DACH1Q9UI36 760 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 POLIQ9UNA4 740 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 INSL5Q9Y5Q6 135 aa6.62□□□□□ -1.35
CNOT1-204ENST00000563130 TTC28Q96AY4 2481 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 LOC730098B7Z3J9 87 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 P4HA2O15460 535 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 FGFR1OPO95684 399 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 ACAT1P24752 427 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 PCSK1P29120 753 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 ELF1P32519 619 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 FMO5P49326 533 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 NOP14P78316 857 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 MYL7Q01449 175 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DUSP4Q13115 394 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 NFE2Q16621 373 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CFAP221Q4G0U5 840 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC40Q4G0X9 1142 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SLC39A12Q504Y0 691 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DCAF17Q5H9S7 520 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SPOPLQ6IQ16 392 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 LIAT1Q6ZQX7 453 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DCP1BQ8IZD4 617 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 LMO3Q8TAP4 145 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SPPL2BQ8TCT7 592 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SMG7Q92540 1137 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 NECAB3Q96P71 396 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 PI4K2AQ9BTU6 479 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SDCBP2Q9H190 292 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SMYD3Q9H7B4 428 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CD320Q9NPF0 282 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CRTAC1Q9NQ79 661 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 RAB20Q9NX57 234 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 GTF3C4Q9UKN8 822 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CDH9Q9ULB4 789 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 USTQ9Y2C2 406 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 C2orf16Q68DN1 1984 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 TCF20Q9UGU0 1960 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DENND4AQ7Z401 1863 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 PRRG1O14668 218 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 GNL1P36915 607 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 PIK3CAP42336 1068 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CDH8P55286 799 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 TSPY1Q01534 308 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 INCA1Q0VD86 236 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC142Q17RM4 750 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 TTC9BQ8N6N2 239 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 ENOX1Q8TC92 643 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 UHRF1Q96T88 793 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 SYT15Q9BQS2 421 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 THAP9Q9H5L6 903 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 MMRN2Q9H8L6 949 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 ABCB6Q9NP58 842 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 AVENQ9NQS1 362 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CEP72Q9P209 647 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 DNMT3BQ9UBC3 853 aaKnown RBP6.61□□□□□ -1.35
CNOT1-204ENST00000563130 YIPF1Q9Y548 306 aa6.61□□□□□ -1.35
CNOT1-204ENST00000563130 CCL16O15467 120 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 N4BP1O75113 896 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 ATP2C2O75185 946 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 XYLBO75191 536 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 LRG1P02750 347 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 HAPLN1P10915 354 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 P4HA1P13674 534 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 ATF6P18850 670 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 TUFMP49411 452 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 EPHA5P54756 1037 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 TWF1Q12792 350 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 KCNH2Q12809 1159 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 CAVIN1Q6NZI2 390 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 UNC93AQ86WB7 457 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 GJD3Q8N144 294 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 CRYBG2Q8N1P7 616 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 OR6B3Q8NGW1 331 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 CNOT6LQ96LI5 555 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 LRRC3Q9BY71 257 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 NIF3L1Q9GZT8 377 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 FAM124BQ9H5Z6 455 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms