RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 PPP1R37O75864 691 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 NOL4O94818 638 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 APBB3O95704 486 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 GJB2P29033 226 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 ADSSP30520 456 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 LONP1P36776 959 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 GALK1P51570 392 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 USP4Q13107 963 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 POSTNQ15063 836 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 ZNF77Q15935 545 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 INTS6LQ5JSJ4 861 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 RNF43Q68DV7 783 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 NAIF1Q69YI7 327 aaPredicted RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 TCEAL6Q6IPX3 200 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 TMEM86AQ8N2M4 240 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 CD101Q93033 1021 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 TCEAL3Q969E4 200 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 ACBD6Q9BR61 282 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 TRPC7Q9HCX4 862 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 POLR3BQ9NW08 1133 aaPredicted RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 DUS2Q9NX74 493 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 EBF1Q9UH73 591 aa11.04□□□□□ -0.64
BBS4-205ENST00000562219 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
BBS4-205ENST00000562219 FAM208BQ5VWN6 2430 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 HUS1O60921 280 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 RHOBTB1O94844 696 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 KCNK5O95279 499 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 ITGB3P05106 788 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 CKMP06732 381 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 USP17L7P0C7H9 530 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 ACAT1P24752 427 aaKnown RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 CYP2F1P24903 491 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 POLR2BP30876 1174 aaKnown RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 IFNAR2P48551 515 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 TFAMQ00059 246 aaKnown RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 MYL7Q01449 175 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 GRIN1Q05586 938 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 DMC1Q14565 340 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 RABEP1Q15276 862 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 DDR2Q16832 855 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 SDHAF4Q5VUM1 108 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 ZNF720Q7Z2F6 126 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 SFR1Q86XK3 245 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 BRSK2Q8IWQ3 736 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 SPATA18Q8TC71 538 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 EZH1Q92800 747 aaPredicted RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 SLC22A12Q96S37 553 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 PKMYT1Q99640 499 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 EDEM2Q9BV94 578 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 SEL1LQ9UBV2 794 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 MYH10P35580 1976 aa11.03□□□□□ -0.64
BBS4-205ENST00000562219 ASCC3Q8N3C0 2202 aaKnown RBP11.03□□□□□ -0.64
BBS4-205ENST00000562219 ADAMTS9Q9P2N4 1935 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 BCLAF3A2AJT9 711 aaKnown RBP11.02□□□□□ -0.65
BBS4-205ENST00000562219 DCLK1O15075 740 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 PCSK1P29120 753 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 DDIT3P35638 169 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 WNT7BP56706 349 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 CREB5Q02930 508 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 PSMD2Q13200 908 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 EML3Q32P44 896 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 C11orf74Q86VG3 221 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 TOP6BLQ8N6T0 577 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 LRRC52Q8N7C0 313 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 FSIP1Q8NA03 581 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 TTC16Q8NEE8 873 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 CACTINQ8WUQ7 758 aaKnown RBP11.02□□□□□ -0.65
BBS4-205ENST00000562219 FUBP3Q96I24 572 aaKnown RBP eCLIP11.02□□□□□ -0.65
BBS4-205ENST00000562219 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 CYP2S1Q96SQ9 504 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 STRA6Q9BX79 667 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 MRPL44Q9H9J2 332 aaKnown RBP11.02□□□□□ -0.65
BBS4-205ENST00000562219 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 RBAKQ9NYW8 714 aaPredicted RBP11.02□□□□□ -0.65
BBS4-205ENST00000562219 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 GTF3C4Q9UKN8 822 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 ITGA11Q9UKX5 1188 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 EXOC7Q9UPT5 735 aa11.02□□□□□ -0.65
BBS4-205ENST00000562219 LNP1A1A4G5 178 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms