RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 PRR23CQ6ZRP0 262 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 FAM160A2Q8N612 972 aaPredicted RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 MRPS31Q92665 395 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 SAAL1Q96ER3 474 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 LOXL4Q96JB6 756 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 CEP295NLQ96MC4 621 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 CBWD1Q9BRT8 395 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 PI4K2AQ9BTU6 479 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 FGFBP2Q9BYJ0 223 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 CFAP47Q6ZTR5 3102 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 ATG13O75143 517 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 CYP2F1P24903 491 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 MAGEA11P43364 429 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 RAP1GAPP47736 663 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 RBP5P82980 135 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 AMPD2Q01433 879 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 GRSF1Q12849 480 aaKnown RBP eCLIP15.62■□□□□ 0.09
SPG7-205ENST00000561945 BFSP1Q12934 665 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 ZNF77Q15935 545 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 SOWAHAQ2M3V2 549 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 PKN3Q6P5Z2 889 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 OSTM1Q86WC4 334 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 GPD1LQ8N335 351 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 CAMKK1Q8N5S9 505 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 GAB3Q8WWW8 586 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 INTS4Q96HW7 963 aaKnown RBP15.62■□□□□ 0.09
SPG7-205ENST00000561945 TBC1D7Q9P0N9 293 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 GCNT4Q9P109 453 aa15.62■□□□□ 0.09
SPG7-205ENST00000561945 ADRB1P08588 477 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 DRD1P21728 446 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 NASPP49321 788 aaPredicted RBP15.61■□□□□ 0.09
SPG7-205ENST00000561945 CDR1P51861 262 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 LIMK1P53667 647 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 FAM160A1Q05DH4 1040 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 USP4Q13107 963 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 DDR2Q16832 855 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 FBXO43Q4G163 708 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 TRIM68Q6AZZ1 485 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 FAM173BQ6P4H8 233 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.61■□□□□ 0.09
SPG7-205ENST00000561945 CSGALNACT2Q8N6G5 542 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 KIAA1958Q8N8K9 716 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 ZC3H10Q96K80 434 aaKnown RBP15.61■□□□□ 0.09
SPG7-205ENST00000561945 SPATA17Q96L03 361 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 EBF3Q9H4W6 596 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
SPG7-205ENST00000561945 PDE11AQ9HCR9 933 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 PANK4Q9NVE7 773 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 GTF3C4Q9UKN8 822 aa15.61■□□□□ 0.09
SPG7-205ENST00000561945 CNOT1A5YKK6 2376 aaKnown RBP15.61■□□□□ 0.09
SPG7-205ENST00000561945 SPAG17Q6Q759 2223 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 DCDC2BA2VCK2 349 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 PFKLP17858 780 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 ACAT1P24752 427 aaKnown RBP15.6■□□□□ 0.09
SPG7-205ENST00000561945 PCSK1P29120 753 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 GJA4P35212 333 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 HOXD13P35453 343 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 STAT6P42226 847 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 MTF1Q14872 753 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 E2F4Q16254 413 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 ADGRF2Q8IZF7 708 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 SYCP3Q8IZU3 236 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 STKLD1Q8NE28 680 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 OSCP1Q8WVF1 389 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 KBTBD7Q8WVZ9 684 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 USP28Q96RU2 1077 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 MTMR12Q9C0I1 747 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 TNMDQ9H2S6 317 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 ZSCAN16Q9H4T2 348 aaPredicted RBP15.6■□□□□ 0.09
SPG7-205ENST00000561945 KBTBD4Q9NVX7 518 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 MAGED2Q9UNF1 606 aaPredicted RBP15.6■□□□□ 0.09
SPG7-205ENST00000561945 MTMR6Q9Y217 621 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 SNX9Q9Y5X1 595 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 LAMA1P25391 3075 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 PTPRJQ12913 1337 aa15.6■□□□□ 0.09
SPG7-205ENST00000561945 USP24Q9UPU5 2620 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.59■□□□□ 0.09
SPG7-205ENST00000561945 GOLGA8IPA6NC78 632 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 GOLGA8JA6NMD2 632 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 TM4SF5O14894 197 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 EPN2O95208 641 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 EGFP01133 1207 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 FAM163BP0C2L3 166 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 USP17L7P0C7H9 530 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 IDEP14735 1019 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 ARSAP15289 507 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 GALK1P51570 392 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 SURF1Q15526 300 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 CCDC142Q17RM4 750 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 PLA2G2CQ5R387 149 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 SDHAF4Q5VUM1 108 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 HEATR6Q6AI08 1181 aaKnown RBP15.59■□□□□ 0.09
SPG7-205ENST00000561945 CC2D1AQ6P1N0 951 aaPredicted RBP15.59■□□□□ 0.09
SPG7-205ENST00000561945 VSTM1Q6UX27 236 aa15.59■□□□□ 0.09
SPG7-205ENST00000561945 EPM2AIP1Q7L775 607 aaPredicted RBP15.59■□□□□ 0.09
SPG7-205ENST00000561945 SYT13Q7L8C5 426 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms